RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 BCAT1P54687 386 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 MLLT6P55198 1093 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 GCNT1Q02742 428 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 BST2Q10589 180 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 EFEMP1Q12805 493 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 SRSF5Q13243 272 aaKnown RBP11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 KCNJ12Q14500 433 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 TPD52L1Q16890 204 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 C10orf120Q5SQS8 335 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 LY6G5CQ5SRR4 150 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 TMEM25Q86YD3 366 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 CPA6Q8N4T0 437 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 TTC39CQ8N584 583 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 NAT16Q8N8M0 369 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 SLC35F5Q8WV83 523 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 EDEM1Q92611 657 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 ATP2A3Q93084 1043 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 TUBGCP2Q9BSJ2 902 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 PNPLA8Q9NP80 782 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 ATG2BQ96BY7 2078 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
RAPGEF1-207ENST00000481260 EP300Q09472 2414 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 GVINP1Q7Z2Y8 2422 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 K7ESF4 209 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 LAMTOR5O43504 91 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 RNF40O75150 1001 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 PFKLP17858 780 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 PDE6CP51160 858 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 SEC13P55735 322 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 YWHAGP61981 247 aaKnown RBP eCLIP11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 YWHAEP62258 255 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 KDSRQ06136 332 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 CNGA2Q16280 664 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 MAN2A1Q16706 1144 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 TCP11X2Q5H9J9 407 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 PM20D1Q6GTS8 502 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 BHMTQ93088 406 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 P2RY13Q9BPV8 354 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 UBXN6Q9BZV1 441 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 NACA2Q9H009 215 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 NDST4Q9H3R1 872 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 APEX2Q9UBZ4 518 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 RASAL2Q9UJF2 1139 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 HCN2Q9UL51 889 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 FHOD1Q9Y613 1164 aa11.98□□□□□ -0.49
RAPGEF1-207ENST00000481260 E2F8A0AVK6 867 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 PRR23AA6NEV1 266 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 K7EQS6 105 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 FOXN3O00409 490 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 EPHB6O15197 1021 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 MSI1O43347 362 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 STC2O76061 302 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 LETM1O95202 739 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 ZBED1O96006 694 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 HNRNPLP14866 589 aaKnown RBP eCLIP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 ATP5C1P36542 298 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 USP8P40818 1118 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 GPD2P43304 727 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 CETN1Q12798 172 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 NCAPHQ15003 741 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 KRT31Q15323 416 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 CCDC183Q5T5S1 534 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 Q6ZNB5 142 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 PASD1Q8IV76 773 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 WDTC1Q8N5D0 677 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 SHC3Q92529 594 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 NELL1Q92832 810 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 CD101Q93033 1021 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 MSANTD3Q96H12 275 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 LSM14BQ9BX40 385 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 MIS12Q9H081 205 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 VPS16Q9H269 839 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 FAM124BQ9H5Z6 455 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 PLCB1Q9NQ66 1216 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 SFMBT1Q9UHJ3 866 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 DNAJC12Q9UKB3 198 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 SH3BP1Q9Y3L3 701 aa11.97□□□□□ -0.49
RAPGEF1-207ENST00000481260 CHURC1-FNTBB4DL54 471 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 PROB1E7EW31 1015 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 NCAM2O15394 837 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 THAP12O43422 761 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 GFRA3O60609 400 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 NFATC1O95644 943 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 FYNP06241 537 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 ADH5P11766 374 aa11.96□□□□□ -0.49
RAPGEF1-207ENST00000481260 CLCN1P35523 988 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms