RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ACSF2Q96CM8 615 aaPredicted RBP19.98■□□□□ 0.79
CCM2-214ENST00000481194 PCDH9Q9HC56 1237 aa19.98■□□□□ 0.79
CCM2-214ENST00000481194 CSH1P0DML2 217 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 CSH2P0DML3 217 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 RFC2P35250 354 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 ZNF200P98182 395 aaPredicted RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 ILF2Q12905 390 aaKnown RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 NUGGCQ68CJ6 796 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 TSSK1BQ9BXA7 367 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.97■□□□□ 0.79
CCM2-214ENST00000481194 STYXL1Q9Y6J8 313 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 NEMP1O14524 444 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 EIF3HO15372 352 aaKnown RBP eCLIP19.97■□□□□ 0.79
CCM2-214ENST00000481194 CDH16O75309 829 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 PPP2R2AP63151 447 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.97■□□□□ 0.79
CCM2-214ENST00000481194 TSPAN17Q96FV3 270 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 MRPL45Q9BRJ2 306 aaKnown RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 MSRAQ9UJ68 235 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 WARSP23381 471 aaKnown RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 GJA5P36382 358 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 MAGEA4P43358 317 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 USP33Q8TEY7 942 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 ELMO3Q96BJ8 720 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 TTYH3Q9C0H2 523 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 SQORQ9Y6N5 450 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 FGF10O15520 208 aaPredicted RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 SESN2P58004 480 aaPredicted RBP19.97■□□□□ 0.79
CCM2-214ENST00000481194 FAM35AQ86V20 835 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 SPPL2BQ8TCT7 592 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 NAT9Q9BTE0 207 aa19.97■□□□□ 0.79
CCM2-214ENST00000481194 DNAJB2P25686 324 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 MIPP30301 263 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 IFNAR2P48551 515 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 CTCFP49711 727 aaPredicted RBP19.96■□□□□ 0.79
CCM2-214ENST00000481194 AGBL2Q5U5Z8 902 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 IKZF4Q9H2S9 585 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 GPATCH2LQ9NWQ4 482 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 ATP9BO43861 1147 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 CCND3P30281 292 aaPredicted RBP19.96■□□□□ 0.79
CCM2-214ENST00000481194 HDAC11Q96DB2 347 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 TUBB6Q9BUF5 446 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 PSMC3IPQ9P2W1 217 aaPredicted RBP19.96■□□□□ 0.79
CCM2-214ENST00000481194 SMG5Q9UPR3 1016 aaKnown RBP19.96■□□□□ 0.79
CCM2-214ENST00000481194 FGF19O95750 216 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 PSMD5Q16401 504 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 ZBTB41Q5SVQ8 909 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 VSTM1Q6UX27 236 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 PIGZQ86VD9 579 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 STMN2Q93045 179 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 PCYT2Q99447 389 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 TTPALQ9BTX7 342 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 TAS2R14Q9NYV8 317 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 RENBPP51606 427 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 CTU1Q7Z7A3 348 aaKnown RBP19.96■□□□□ 0.79
CCM2-214ENST00000481194 NUP93Q8N1F7 819 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 C11orf49Q9H6J7 331 aa19.96■□□□□ 0.79
CCM2-214ENST00000481194 RGS20O76081 388 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 ADH1AP07327 375 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 PCK1P35558 622 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 KCNJ1P48048 391 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 DENND5BQ6ZUT9 1274 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 TMEM161AQ9NX61 479 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCM2-214ENST00000481194 USP17L7P0C7H9 530 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 UCMAQ8WVF2 138 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 SPG21Q9NZD8 308 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 SLC25A13Q9UJS0 675 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 FNDC3AQ9Y2H6 1198 aaKnown RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 SH3BP5O60239 455 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 RHOCP08134 193 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 SLC10A6Q3KNW5 377 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 NXNQ6DKJ4 435 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 DDX53Q86TM3 631 aaKnown RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 OR6P1Q8NGX9 317 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 TRHDEQ9UKU6 1024 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 ARL5CA6NH57 179 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 F5H423 210 aaPredicted RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 POLD3Q15054 466 aaPredicted RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 SKIV2LQ15477 1246 aaKnown RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 GDF6Q6KF10 455 aaPredicted RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 IRGQQ8WZA9 623 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 RAB3IPQ96QF0 476 aaPredicted RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 CCL5P13501 91 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 ATP6V1E2Q96A05 226 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 AGAP3Q96P47 875 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 VAT1Q99536 393 aa19.95■□□□□ 0.78
CCM2-214ENST00000481194 TRMT13Q9NUP7 481 aaKnown RBP19.95■□□□□ 0.78
CCM2-214ENST00000481194 CHEK2O96017 543 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 EDEM1Q92611 657 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 C16orf70Q9BSU1 422 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 VPS9D1Q9Y2B5 631 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 APOC4-APOC2K7ER74 178 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 SOCS7O14512 581 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 APOC2P02655 101 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 MAGOHP61326 146 aaKnown RBP19.94■□□□□ 0.78
CCM2-214ENST00000481194 ANKMY2Q8IV38 441 aa19.94■□□□□ 0.78
CCM2-214ENST00000481194 C2orf15Q8WU43 125 aaKnown RBP19.94■□□□□ 0.78
CCM2-214ENST00000481194 PGLYRP2Q96PD5 576 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms