RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 PTPN20Q4JDL3 420 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 NAA35Q5VZE5 725 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 E4F1Q66K89 784 aaPredicted RBP21.34■■□□□ 1.01
CTSA-206ENST00000480961 CC2D1AQ6P1N0 951 aaPredicted RBP21.34■■□□□ 1.01
CTSA-206ENST00000480961 RSRC2Q7L4I2 434 aaKnown RBP21.34■■□□□ 1.01
CTSA-206ENST00000480961 SIX5Q8N196 739 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 TMEM35BQ8NCS4 154 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 PCDHB18PQ96TA0 734 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 KLF16Q9BXK1 252 aaPredicted RBP21.34■■□□□ 1.01
CTSA-206ENST00000480961 RASAL2Q9UJF2 1139 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 DNMT3LQ9UJW3 386 aa21.34■■□□□ 1.01
CTSA-206ENST00000480961 KRBA1A5PL33 1030 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 CHADO15335 359 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 CBFA2T2O43439 604 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 TPM3P06753 285 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 HMBSP08397 361 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 ARSAP15289 507 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 FERP16591 822 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 USP4Q13107 963 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 ASIC2Q16515 512 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 ARHGAP29Q52LW3 1261 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 SLC44A4Q53GD3 710 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 C2CD6Q53TS8 623 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 IRF2BP2Q7Z5L9 587 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 IRGQQ8WZA9 623 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 PIWIL1Q96J94 861 aaKnown RBP21.33■■□□□ 1.01
CTSA-206ENST00000480961 NOX5Q96PH1 765 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 EBF3Q9H4W6 596 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 SYNCQ9H7C4 482 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 C11orf16Q9NQ32 467 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 HEBP1Q9NRV9 189 aa21.33■■□□□ 1.01
CTSA-206ENST00000480961 SEPT11Q9NVA2 429 aaKnown RBP21.33■■□□□ 1.01
CTSA-206ENST00000480961 ARNTLO00327 626 aa21.32■■□□□ 1
CTSA-206ENST00000480961 SFMBT2Q5VUG0 894 aa21.32■■□□□ 1
CTSA-206ENST00000480961 OR6B2Q6IFH4 312 aa21.32■■□□□ 1
CTSA-206ENST00000480961 ZNF677Q86XU0 584 aa21.32■■□□□ 1
CTSA-206ENST00000480961 SCML4Q8N228 414 aa21.32■■□□□ 1
CTSA-206ENST00000480961 SLC30A5Q8TAD4 765 aa21.32■■□□□ 1
CTSA-206ENST00000480961 RNF139Q8WU17 664 aa21.32■■□□□ 1
CTSA-206ENST00000480961 IRF7Q92985 503 aa21.32■■□□□ 1
CTSA-206ENST00000480961 FAM149B1Q96BN6 582 aa21.32■■□□□ 1
CTSA-206ENST00000480961 AGPAT1Q99943 283 aa21.32■■□□□ 1
CTSA-206ENST00000480961 NUP58Q9BVL2 599 aa21.32■■□□□ 1
CTSA-206ENST00000480961 DUS2Q9NX74 493 aaKnown RBP21.32■■□□□ 1
CTSA-206ENST00000480961 GTSE1Q9NYZ3 720 aa21.32■■□□□ 1
CTSA-206ENST00000480961 WNT16Q9UBV4 365 aa21.32■■□□□ 1
CTSA-206ENST00000480961 MYH10P35580 1976 aa21.32■■□□□ 1
CTSA-206ENST00000480961 LTFP02788 710 aa21.31■■□□□ 1
CTSA-206ENST00000480961 FYNP06241 537 aa21.31■■□□□ 1
CTSA-206ENST00000480961 SKILP12757 684 aa21.31■■□□□ 1
CTSA-206ENST00000480961 CDH5P33151 784 aaPredicted RBP21.31■■□□□ 1
CTSA-206ENST00000480961 SOX9P48436 509 aa21.31■■□□□ 1
CTSA-206ENST00000480961 NOMO3P69849 1222 aa21.31■■□□□ 1
CTSA-206ENST00000480961 PFKPQ01813 784 aa21.31■■□□□ 1
CTSA-206ENST00000480961 FIGNQ5HY92 759 aa21.31■■□□□ 1
CTSA-206ENST00000480961 FAM183BPQ6ZVS7 135 aa21.31■■□□□ 1
CTSA-206ENST00000480961 PHLDB2Q86SQ0 1253 aa21.31■■□□□ 1
CTSA-206ENST00000480961 TADA2BQ86TJ2 420 aa21.31■■□□□ 1
CTSA-206ENST00000480961 ERICH1Q86X53 443 aa21.31■■□□□ 1
CTSA-206ENST00000480961 CSGALNACT1Q8TDX6 532 aa21.31■■□□□ 1
CTSA-206ENST00000480961 GOLGA1Q92805 767 aa21.31■■□□□ 1
CTSA-206ENST00000480961 FAM83CQ9BQN1 747 aa21.31■■□□□ 1
CTSA-206ENST00000480961 EDEM3Q9BZQ6 932 aa21.31■■□□□ 1
CTSA-206ENST00000480961 HPS4Q9NQG7 708 aa21.31■■□□□ 1
CTSA-206ENST00000480961 ARHGEF3Q9NR81 526 aa21.31■■□□□ 1
CTSA-206ENST00000480961 ABCC13Q9NSE7 274 aa21.31■■□□□ 1
CTSA-206ENST00000480961 MARCH2Q9P0N8 246 aa21.31■■□□□ 1
CTSA-206ENST00000480961 SFMBT1Q9UHJ3 866 aa21.31■■□□□ 1
CTSA-206ENST00000480961 MYO6Q9UM54 1294 aa21.31■■□□□ 1
CTSA-206ENST00000480961 NAALADL1Q9UQQ1 740 aa21.31■■□□□ 1
CTSA-206ENST00000480961 SH3BP1Q9Y3L3 701 aa21.31■■□□□ 1
CTSA-206ENST00000480961 PATJQ8NI35 1801 aa21.31■■□□□ 1
CTSA-206ENST00000480961 SLC12A8A0AV02 714 aa21.3■■□□□ 1
CTSA-206ENST00000480961 OTOL1A6NHN0 477 aaPredicted RBP21.3■■□□□ 1
CTSA-206ENST00000480961 STK25O00506 426 aa21.3■■□□□ 1
CTSA-206ENST00000480961 GRAP2O75791 330 aa21.3■■□□□ 1
CTSA-206ENST00000480961 LSM8O95777 96 aaKnown RBP21.3■■□□□ 1
CTSA-206ENST00000480961 CD72P21854 359 aa21.3■■□□□ 1
CTSA-206ENST00000480961 IFNAR2P48551 515 aa21.3■■□□□ 1
CTSA-206ENST00000480961 KLHDC10Q6PID8 442 aa21.3■■□□□ 1
CTSA-206ENST00000480961 OSCP1Q8WVF1 389 aa21.3■■□□□ 1
CTSA-206ENST00000480961 CDK5RAP1Q96SZ6 601 aaKnown RBP21.3■■□□□ 1
CTSA-206ENST00000480961 ZNF638Q14966 1978 aaKnown RBP21.29■■□□□ 1
CTSA-206ENST00000480961 OBSL1O75147 1896 aa21.29■■□□□ 1
CTSA-206ENST00000480961 A0A1W2PQJ5 194 aa21.29■■□□□ 1
CTSA-206ENST00000480961 CYP1A1P04798 512 aaPredicted RBP21.29■■□□□ 1
CTSA-206ENST00000480961 GYPCP04921 128 aa21.29■■□□□ 1
CTSA-206ENST00000480961 CCDC172P0C7W6 258 aa21.29■■□□□ 1
CTSA-206ENST00000480961 NCAM1P13591 858 aa21.29■■□□□ 1
CTSA-206ENST00000480961 TCF3P15923 654 aa21.29■■□□□ 1
CTSA-206ENST00000480961 KPNA1P52294 538 aaPredicted RBP21.29■■□□□ 1
CTSA-206ENST00000480961 MLF2Q15773 248 aaPredicted RBP21.29■■□□□ 1
CTSA-206ENST00000480961 SYPL2Q5VXT5 272 aa21.29■■□□□ 1
CTSA-206ENST00000480961 MMS22LQ6ZRQ5 1243 aa21.29■■□□□ 1
CTSA-206ENST00000480961 TPRG1Q6ZUI0 275 aa21.29■■□□□ 1
CTSA-206ENST00000480961 DDX42Q86XP3 938 aaKnown RBP eCLIP21.29■■□□□ 1
CTSA-206ENST00000480961 FMNL3Q8IVF7 1028 aa21.29■■□□□ 1
CTSA-206ENST00000480961 ZNF276Q8N554 614 aa21.29■■□□□ 1
CTSA-206ENST00000480961 FLCNQ8NFG4 579 aa21.29■■□□□ 1
CTSA-206ENST00000480961 IPO4Q8TEX9 1081 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms