RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 CNOT6LQ96LI5 555 aaKnown RBP12.05□□□□□ -0.48
CCM2-213ENST00000480658 NT5C1BQ96P26 610 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 CCSER2Q9H7U1 834 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCM2-213ENST00000480658 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 MARK1Q9P0L2 795 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 NAGPAQ9UK23 515 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 USP3Q9Y6I4 520 aa12.05□□□□□ -0.48
CCM2-213ENST00000480658 XPO1O14980 1071 aaKnown RBP12.04□□□□□ -0.48
CCM2-213ENST00000480658 CYP26A1O43174 497 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 BEST1O76090 585 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 CYBBP04839 570 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 VDRP11473 427 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 RARGP13631 454 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 FMO5P49326 533 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 ZNF132P52740 706 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 UBE2HP62256 183 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 ZXDBP98169 803 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 GCNT1Q02742 428 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 ORC1Q13415 861 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 ANO4Q32M45 955 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 LY6G5CQ5SRR4 150 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 RHBDF2Q6PJF5 856 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 RSRC2Q7L4I2 434 aaKnown RBP12.04□□□□□ -0.48
CCM2-213ENST00000480658 ENOSF1Q7L5Y1 443 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 SIX6OS1Q8N1H7 587 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 C12orf50Q8NA57 414 aaPredicted RBP12.04□□□□□ -0.48
CCM2-213ENST00000480658 SLC4A11Q8NBS3 891 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 WHAMMQ8TF30 809 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 GOLGA1Q92805 767 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 IPO9Q96P70 1041 aaKnown RBP12.04□□□□□ -0.48
CCM2-213ENST00000480658 TWNKQ96RR1 684 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
CCM2-213ENST00000480658 LRRC4Q9HBW1 653 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 SEMA4GQ9NTN9 838 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 ZNF292O60281 2723 aa12.04□□□□□ -0.48
CCM2-213ENST00000480658 CFAP54Q96N23 3096 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 TBC1D3BA6NDS4 549 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 HHLA1C9JL84 531 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 K7EQS6 105 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 SART1O43290 800 aaKnown RBP12.03□□□□□ -0.48
CCM2-213ENST00000480658 HRO43593 1189 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 CACNG3O60359 315 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 EPN2O95208 641 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 RAD23BP54727 409 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
CCM2-213ENST00000480658 CRY1Q16526 586 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 MEA1Q16626 185 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 CBWD6Q4V339 395 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 RAB41Q5JT25 222 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 CBWD3Q5JTY5 395 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 CBWD5Q5RIA9 395 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 PRR23CQ6ZRP0 262 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 RASSF3Q86WH2 238 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 BBS7Q8IWZ6 715 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 ETFBKMTQ8IXQ9 262 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 SCML4Q8N228 414 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
CCM2-213ENST00000480658 TERB1Q8NA31 727 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 KCTD13Q8WZ19 329 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 PLD4Q96BZ4 506 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 HHIPQ96QV1 700 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 BBS2Q9BXC9 721 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 KLF16Q9BXK1 252 aaPredicted RBP12.03□□□□□ -0.48
CCM2-213ENST00000480658 CNGB3Q9NQW8 809 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 MAN1B1Q9UKM7 699 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 TSPAN16Q9UKR8 245 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 GVINP1Q7Z2Y8 2422 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 MYO16Q9Y6X6 1858 aa12.03□□□□□ -0.48
CCM2-213ENST00000480658 A0A1W2PQH9 124 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 GFRA2O00451 464 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 TULP3O75386 442 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 LATS1O95835 1130 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 ZBED1O96006 694 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 IRF1P10914 325 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 CD19P15391 556 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 HARS2P49590 506 aaKnown RBP12.02□□□□□ -0.49
CCM2-213ENST00000480658 LIMK1P53667 647 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 YWHAGP61981 247 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCM2-213ENST00000480658 SPEM2Q0P670 501 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 MORC3Q14149 939 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 RSPO4Q2I0M5 234 aaPredicted RBP12.02□□□□□ -0.49
CCM2-213ENST00000480658 C2orf27AQ580R0 203 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 PM20D1Q6GTS8 502 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 KLHL10Q6JEL2 608 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 TTI2Q6NXR4 508 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 RABEPKQ7Z6M1 372 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 PIGZQ86VD9 579 aa12.02□□□□□ -0.49
CCM2-213ENST00000480658 PPM1KQ8N3J5 372 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms