RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 AP1B1Q10567 949 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 TBCCQ15814 346 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 SH2D5Q6ZV89 423 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 CRLF3Q8IUI8 442 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 RNF149Q8NC42 400 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 RAB3IL1Q8TBN0 382 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
PKP4-210ENST00000480171 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 LRRC39Q96DD0 335 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 MPHOSPH6Q99547 160 aaKnown RBP9.03□□□□□ -0.96
PKP4-210ENST00000480171 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 RPF1Q9H9Y2 349 aaKnown RBP9.03□□□□□ -0.96
PKP4-210ENST00000480171 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.03□□□□□ -0.96
PKP4-210ENST00000480171 PPARGC1AQ9UBK2 798 aaKnown RBP9.03□□□□□ -0.96
PKP4-210ENST00000480171 SCOCQ9UIL1 159 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 PLLPQ9Y342 182 aa9.03□□□□□ -0.96
PKP4-210ENST00000480171 DPPA5A6NC42 116 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 EIF4E1BA6NMX2 242 aaKnown RBP9.02□□□□□ -0.96
PKP4-210ENST00000480171 B2RBV5 119 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 F8W8V4 182 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 SPECC1L-ADORA2AF8WAN1 911 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 M0QYV0 167 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 KCNN4O15554 427 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 MAGEC1O60732 1142 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 MICAL2O94851 1124 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 FARP2O94887 1054 aaPredicted RBP9.02□□□□□ -0.96
PKP4-210ENST00000480171 ZBED1O96006 694 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 RAP1GDS1P52306 607 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 YWHAZP63104 245 aaKnown RBP9.02□□□□□ -0.96
PKP4-210ENST00000480171 PDK2Q15119 407 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 TAF5Q15542 800 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 NBPF12Q5TAG4 269 aaPredicted RBP9.02□□□□□ -0.96
PKP4-210ENST00000480171 ATF7IP2Q5U623 682 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.96
PKP4-210ENST00000480171 C1orf228Q6PIY5 440 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 NUDCD3Q8IVD9 361 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 TMEM176AQ96HP8 235 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 RNF157Q96PX1 679 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 WRNIP1Q96S55 665 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 PCYT2Q99447 389 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 MKS1Q9NXB0 559 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 STK32BQ9NY57 414 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 TTLL3Q9Y4R7 772 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
PKP4-210ENST00000480171 ACKR2O00590 384 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 ENDOD1O94919 500 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 HMGCRP04035 888 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 VDRP11473 427 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 PDGFRAP16234 1089 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 TGM2P21980 687 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 TCF7P36402 384 aaPredicted RBP9.02□□□□□ -0.97
PKP4-210ENST00000480171 BCAR1P56945 870 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
PKP4-210ENST00000480171 OSTNP61366 133 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
PKP4-210ENST00000480171 RCN2Q14257 317 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 DNAL1Q4LDG9 190 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 FAM161BQ96MY7 647 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 ACAP3Q96P50 834 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 NMUR2Q9GZQ4 415 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 CYP3A43Q9HB55 503 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 TAGLN3Q9UI15 199 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 TMA7Q9Y2S6 64 aaKnown RBP9.02□□□□□ -0.97
PKP4-210ENST00000480171 SSC5DA1L4H1 1573 aa9.02□□□□□ -0.97
PKP4-210ENST00000480171 APOL1O14791 398 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 SMIM24O75264 130 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 PRKCHP24723 683 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 RPS12P25398 132 aaKnown RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 SERPINB9P50453 376 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 CDH8P55286 799 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 CNTN2Q02246 1040 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 BST1Q10588 318 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 PDAP1Q13442 181 aaKnown RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 PLEKHG6Q3KR16 790 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 BOLA3Q53S33 107 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 OR6B2Q6IFH4 312 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 NET1Q7Z628 596 aaPredicted RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 PRPF39Q86UA1 669 aaKnown RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 ARID3BQ8IVW6 561 aaPredicted RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 HEXIM2Q96MH2 286 aaKnown RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 SDCBP2Q9H190 292 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 HACL1Q9UJ83 578 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 C2orf71A6NGG8 1288 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 H3BRJ5 948 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 INO80B-WBP1J3KQ70 363 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 AHCYL1O43865 530 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 CILPO75339 1184 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 AVILO75366 819 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 RECKO95980 971 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 ENO1P06733 434 aaKnown RBP9.01□□□□□ -0.97
PKP4-210ENST00000480171 PROZP22891 400 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 ATICP31939 592 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 CCNFP41002 786 aa9.01□□□□□ -0.97
PKP4-210ENST00000480171 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms