RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 KAT6AQ92794 2004 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 NCANO14594 1321 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CCDC195A0A1B0GUA6 201 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 BICDL2A1A5D9 508 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 WDR27A2RRH5 827 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 F8W810 466 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PSMA7O14818 248 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 FANCGO15287 622 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 EXOC3O60645 756 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 KINO60870 393 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 HUS1O60921 280 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TNNC2P02585 160 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 C4BPAP04003 597 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 C8AP07357 584 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TMEM191BP0C7N4 346 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 P4HA1P13674 534 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 GLULP15104 373 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 WARSP23381 471 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 DDX6P26196 483 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TKTP29401 623 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 MCM4P33991 863 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 OR1D2P34982 312 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 GTF2F1P35269 517 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 MATR3P43243 847 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 AFMP43652 599 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PPP3CCP48454 512 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 OSTNP61366 133 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 MYL7Q01449 175 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 STIM1Q13586 685 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 MEA1Q16626 185 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PTPN21Q16825 1174 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SGSM1Q2NKQ1 1148 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CTXN3Q4LDR2 81 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 ZBTB41Q5SVQ8 909 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 ZBTB37Q5TC79 503 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 OVOS1Q6IE37 1185 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 FAM171BQ6P995 826 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 MTSS1LQ765P7 747 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 UNC93AQ86WB7 457 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 METTL23Q86XA0 190 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CBWD2Q8IUF1 395 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 DCP1BQ8IZD4 617 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TDRD5Q8NAT2 981 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PPM1EQ8WY54 764 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 EDAQ92838 391 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SMARCE1Q969G3 411 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PSMG2Q969U7 264 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 JAKMIP2Q96AA8 810 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 ELMO3Q96BJ8 720 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 TRMT2BQ96GJ1 504 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CRELD1Q96HD1 420 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SPATA17Q96L03 361 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PKMYT1Q99640 499 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CGRRF1Q99675 332 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 DUSP23Q9BVJ7 150 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 OSBPL6Q9BZF3 934 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 DNAI2Q9GZS0 605 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CXCL16Q9H2A7 254 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 GOLPH3LQ9H4A5 285 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CYP3A43Q9HB55 503 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 GOLGA2P5Q9HBQ8 144 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SLC39A2Q9NP94 309 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SLC2A4RGQ9NR83 387 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 METTL5Q9NRN9 209 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 VTI1BQ9UEU0 232 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CDH7Q9ULB5 785 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 SORCS3Q9UPU3 1222 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 R3HCC1Q9Y3T6 440 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 PCDHA5Q9Y5H7 936 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 CDY1Q9Y6F8 540 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 OAS3Q9Y6K5 1087 aaKnown RBP5.24□□□□□ -1.57
PTCD3-213ENST00000480102 ARID2Q68CP9 1835 aa5.24□□□□□ -1.57
PTCD3-213ENST00000480102 FAM92AA1XBS5 289 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 TISP43B9A030 160 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CYB561D2O14569 222 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CETN3O15182 167 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ECI2O75521 394 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 AKAP3O75969 853 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 FGFR1OPO95684 399 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ASS1P00966 412 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 NR3C1P04150 777 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 LAMP2P13473 410 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PTPN2P17706 415 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 TRIM21P19474 475 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CDK11BP21127 795 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 NR2F2P24468 414 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 CCNE1P24864 410 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ERCC5P28715 1186 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ELF1P32519 619 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 MAGEA9P43362 315 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 BRCC3P46736 316 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 LIG3P49916 1009 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 ST13P50502 369 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 PDE6CP51160 858 aa5.23□□□□□ -1.57
PTCD3-213ENST00000480102 RPL10AP62906 217 aaKnown RBP5.23□□□□□ -1.57
PTCD3-213ENST00000480102 NOP14P78316 857 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms