RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ALDH1A3P47895 512 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CNGA3Q16281 694 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 PAOXQ6QHF9 649 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 ATP6V0A1Q93050 837 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 NEURL2Q9BR09 285 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 PCDHGB4Q9UN71 923 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 RABL2BQ9UNT1 228 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 PCDHGB5Q9Y5G0 923 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CRTAMO95727 393 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 RBP3P10745 1247 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 ZNF12P17014 697 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 BGNP21810 368 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CENPCQ03188 943 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 HYIQ5T013 277 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 ANKRD13BQ86YJ7 626 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 CPXCR1Q8N123 301 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 SLC5A5Q92911 643 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 DRC3Q9H069 523 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 WWP1Q9H0M0 922 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 ZNF214Q9UL59 606 aaPredicted RBP11.28□□□□□ -0.6
CHD6-208ENST00000480022 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
CHD6-208ENST00000480022 ADGRA2Q96PE1 1338 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.6
CHD6-208ENST00000480022 LRRN2O75325 713 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 ALDH1A1P00352 501 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 ICAM1P05362 532 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 KCNA2P16389 499 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 PHBP35232 272 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 HOXD13P35453 343 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 CPOXP36551 454 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 FMO5P49326 533 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 CRHR2Q13324 411 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 ANKDD1AQ495B1 522 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 HP1BP3Q5SSJ5 553 aaPredicted RBP11.27□□□□□ -0.6
CHD6-208ENST00000480022 DCDC5Q6ZRR9 648 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 LPCAT2Q7L5N7 544 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 LZTR1Q8N653 840 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.6
CHD6-208ENST00000480022 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 RABGAP1Q9Y3P9 1069 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.6
CHD6-208ENST00000480022 RLFQ13129 1914 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 MYOCOSA0A1B0GUC4 107 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 MEI4A8MW99 385 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 GOLGA8RI6L899 631 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 FOXN3O00409 490 aaPredicted RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 EML1O00423 815 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 CA12O43570 354 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 THRAP10827 490 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 SLC1A1P43005 524 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 EIF2B2P49770 351 aaKnown RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 FASTKD3Q14CZ7 662 aaKnown RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 Q3C1V9 767 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 EFHC2Q5JST6 749 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 FBXO11Q86XK2 927 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 RAB3IL1Q8TBN0 382 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 HAUS8Q9BT25 410 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 CCDC106Q9BWC9 280 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 INTS2Q9H0H0 1204 aaKnown RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 ACP6Q9NPH0 428 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 SCHIP1Q9P0W5 487 aaPredicted RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 CEP350Q5VT06 3117 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 ASTN1O14525 1302 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 PRR5-ARHGAP8B1AHC4 643 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 CLIC2O15247 247 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 POLR2MP0CAP2 368 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 OAZ1P54368 228 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 EPHB1P54762 984 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 ARHGAP8P85298 464 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 SLC25A3Q00325 362 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 CREB5Q02930 508 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 SEPT6Q14141 434 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 ZNF746Q6NUN9 644 aaPredicted RBP11.27□□□□□ -0.61
CHD6-208ENST00000480022 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 TTC13Q8NBP0 860 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 STARD8Q92502 1023 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 USP6NLQ92738 828 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 BORCS5Q969J3 196 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 TTC17Q96AE7 1141 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 COA7Q96BR5 231 aa11.27□□□□□ -0.61
CHD6-208ENST00000480022 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms