RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 FGAP02671 866 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 CKBP12277 381 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 MYL4P12829 197 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 FOXL1Q12952 345 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 ST3GAL2Q16842 350 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 PRR16Q569H4 304 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 FBXO38Q6PIJ6 1188 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 PPP1R32Q7Z5V6 425 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF354CQ86Y25 554 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 LURAP1LQ8IV03 231 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 YAF2Q8IY57 180 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 REXO4Q9GZR2 422 aaKnown RBP6.19□□□□□ -1.42
UPF3A-205ENST00000479712 AGO4Q9HCK5 861 aaKnown RBP6.19□□□□□ -1.42
UPF3A-205ENST00000479712 MRPS18AQ9NVS2 196 aaKnown RBP6.19□□□□□ -1.42
UPF3A-205ENST00000479712 MID2Q9UJV3 735 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 SLC39A10Q9ULF5 831 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 FZD1Q9UP38 647 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 CDYLQ9Y232 598 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 SLC30A1Q9Y6M5 507 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 TAF1P21675 1872 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF536O15090 1300 aa6.19□□□□□ -1.42
UPF3A-205ENST00000479712 TONSLQ96HA7 1378 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 TRANK1O15050 2925 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 MANSC4A6NHS7 340 aaPredicted RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 PI4K2BG5E9Z4 385 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 HNRNPDLO14979 420 aaKnown RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 AREL1O15033 823 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 TRIM13O60858 407 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 VPS4BO75351 444 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 CSTBP04080 98 aaKnown RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 FCER1AP12319 257 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 XRCC6P12956 609 aaKnown RBP eCLIP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 IL1R2P27930 398 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 PDIA3P30101 505 aaKnown RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 CNR2P34972 360 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 VIPR2P41587 438 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 PIGFQ07326 219 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 TCF15Q12870 199 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 BIRC3Q13489 604 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 ZFPM1Q8IX07 1006 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 LRRC56Q8IYG6 542 aaPredicted RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 FUKQ8N0W3 1084 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 TRIM63Q969Q1 353 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 C18orf8Q96DM3 657 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 TOX2Q96NM4 488 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 MOGAT1Q96PD6 335 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 DEFB118Q96PH6 123 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 SMOQ99835 787 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 HEPHQ9BQS7 1158 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 MYLK2Q9H1R3 596 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 HESX1Q9UBX0 185 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 ZFR2Q9UPR6 939 aaKnown RBP6.18□□□□□ -1.42
UPF3A-205ENST00000479712 DGKBQ9Y6T7 804 aa6.18□□□□□ -1.42
UPF3A-205ENST00000479712 FAM234BA2RU67 622 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 GOLGA6L3A6NEY3 463 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 PODXLO00592 558 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 TLR5O60602 858 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 CYP2C9P11712 490 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 FDXRP22570 491 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 GCSHP23434 173 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 RENBPP51606 427 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 WNT3P56703 355 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 ARHGEF6Q15052 776 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 SHHQ15465 462 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 C9orf50Q5SZB4 431 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 TCTN3Q6NUS6 607 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 ZDHHC24Q6UX98 284 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 LDHAL6AQ6ZMR3 332 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 SYT12Q8IV01 421 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 CFAP52Q8N1V2 620 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 ANKRD35Q8N283 1001 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 CCDC150Q8NCX0 1101 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 PRSS33Q8NF86 280 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 CYP2W1Q8TAV3 490 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 MIEF2Q96C03 454 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 MAGEB5Q9BZ81 275 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 TM7SF3Q9NS93 570 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 ZSCAN32Q9NX65 697 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 PPP4R1LQ9P1A2 415 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 TBC1D30Q9Y2I9 924 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 PCDHGB3Q9Y5G1 929 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 SCN7AQ01118 1682 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 NCOR2Q9Y618 2525 aa6.17□□□□□ -1.42
UPF3A-205ENST00000479712 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-205ENST00000479712 MAST4O15021 2626 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 RAB27BO00194 218 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 INMTO95050 263 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 NDST3O95803 873 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 ACVR2AP27037 513 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 HHEXQ03014 270 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 ZNF844Q08AG5 666 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 SLC29A2Q14542 456 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 IQCB1Q15051 598 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 PFKFB4Q16877 469 aa6.16□□□□□ -1.42
UPF3A-205ENST00000479712 ZACNQ401N2 412 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms