RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ACADSP16219 412 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 TARSP26639 723 aaKnown RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 TKTL1P51854 596 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 VEPH1Q14D04 833 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 HSDL1Q3SXM5 330 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 TREML2Q5T2D2 321 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 SIAH1Q8IUQ4 282 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 SLITRK1Q96PX8 696 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 CCDC90BQ9GZT6 254 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 ARHGEF38Q9NXL2 777 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 SLC39A10Q9ULF5 831 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 O00370 1275 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 LHX1P48742 406 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 SLC6A3Q01959 620 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 OLFML2BQ68BL8 750 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 IQSEC1Q6DN90 963 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 MOB2Q70IA6 237 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 PPP1R2P1Q96PQ5 205 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 KDM4CQ9H3R0 1056 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 HEY2Q9UBP5 337 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 LZTS1Q9Y250 596 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 SKAP2O75563 359 aaPredicted RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 GJB1P08034 283 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 ACAT1P24752 427 aaKnown RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 YWHAZP63104 245 aaKnown RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 CYLC2Q14093 348 aaPredicted RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 NBPF20Q3BBV1 942 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 FRA10AC1Q70Z53 315 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 GIPC2Q8TF65 315 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 PPP1R36Q96LQ0 422 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 L3MBTL1Q9Y468 752 aa14.81□□□□□ -0.04
COL20A1-206ENST00000479501 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.81□□□□□ -0.04
COL20A1-206ENST00000479501 E5RI56 91 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 NEMP1O14524 444 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 DDX3YO15523 660 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 B4GALT5O43286 388 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 PMPCBO75439 489 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 UBOX5O94941 541 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 MGAT5BQ3V5L5 792 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 LINC00523Q86TU6 105 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 LRRC15Q8TF66 581 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 NSL1Q96IY1 281 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 CEP19Q96LK0 163 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 WRAP73Q9P2S5 460 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 E2F6O75461 281 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 RECQL4O94761 1208 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 NUDT17P0C025 328 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 MYL2P10916 166 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 CCDC92Q53HC0 331 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 DAW1Q8N136 415 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 NAF1Q96HR8 494 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ALS2Q96Q42 1657 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 C10orf88Q9H8K7 445 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 SIX2Q9NPC8 291 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 PDP2Q9P2J9 529 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 STX18Q9P2W9 335 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 KCNH4Q9UQ05 1017 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 NUP188Q5SRE5 1749 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ANXA9O76027 345 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 KLHL2O95198 593 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 TAS2R40P59535 323 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ADIGQ0VDE8 80 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 AUHQ13825 339 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 TLK2Q86UE8 772 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 SLC2A14Q8TDB8 520 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 SEPT5Q99719 369 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ERVK-5Q9HDB9 667 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 DRG1Q9Y295 367 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 TIMM13Q9Y5L4 95 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 LIASO43766 372 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 JAG1P78504 1218 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 PKN2Q16513 984 aaKnown RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ART4Q93070 314 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ELMO2Q96JJ3 720 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 ZNF512Q96ME7 567 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-206ENST00000479501 SYT15Q9BQS2 421 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 LRRC40Q9H9A6 602 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 COG5Q9UP83 839 aa14.8□□□□□ -0.04
COL20A1-206ENST00000479501 RECQLP46063 649 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 RCN1Q15293 331 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 LLGL2Q6P1M3 1020 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 CALML6Q8TD86 181 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 GLRA3O75311 464 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 JCHAINP01591 159 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 AXLP30530 894 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 CPA2P48052 419 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 C15orf59Q2T9L4 293 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 HABP4Q5JVS0 413 aaKnown RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 COLGALT1Q8NBJ5 622 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 ATXN2LQ8WWM7 1075 aaKnown RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 TSPAN17Q96FV3 270 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms