RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 RMDN2Q96LZ7 410 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 TSEN34Q9BSV6 310 aaKnown RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 APOL6Q9BWW8 343 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 SSU72Q9NP77 194 aaKnown RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 STARD13Q9Y3M8 1113 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 RALGAPA2Q2PPJ7 1873 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 AKAP5P24588 427 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 MGAT5Q09328 741 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 SNX27Q96L92 541 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 HEXIM2Q96MH2 286 aaKnown RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 PEBP4Q96S96 227 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 WDR83Q9BRX9 315 aaKnown RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 DHRS4Q9BTZ2 278 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 FAM124BQ9H5Z6 455 aaPredicted RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 BARX2Q9UMQ3 279 aaPredicted RBP28.67■■■□□ 2.18
CHKB-208ENST00000479003 ST3GAL5Q9UNP4 418 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 NOD1Q9Y239 953 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 C2CD2Q9Y426 696 aa28.67■■■□□ 2.18
CHKB-208ENST00000479003 MCF2LO15068 1137 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 RECQL4O94761 1208 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 SSTR1P30872 391 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 RPA3P35244 121 aaPredicted RBP28.66■■■□□ 2.18
CHKB-208ENST00000479003 KIF12Q96FN5 646 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 ZMAT2Q96NC0 199 aaKnown RBP28.66■■■□□ 2.18
CHKB-208ENST00000479003 RNF19AQ9NV58 838 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 TMEM63AO94886 807 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 STAU1O95793 577 aaKnown RBP28.66■■■□□ 2.18
CHKB-208ENST00000479003 RBP3P10745 1247 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 GPD1P21695 349 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 CCDC15Q0P6D6 951 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 PDK4Q16654 411 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 ZC3H12AQ5D1E8 599 aaKnown RBP28.66■■■□□ 2.18
CHKB-208ENST00000479003 TBC1D1Q86TI0 1168 aaPredicted RBP28.66■■■□□ 2.18
CHKB-208ENST00000479003 CNPY3Q9BT09 278 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 RNF39Q9H2S5 420 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 ACSS3Q9H6R3 686 aa28.66■■■□□ 2.18
CHKB-208ENST00000479003 A0A1W2PPM1 405 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 TCRBV7S3A2A0A539 114 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 TSHRP16473 764 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 PTK7Q13308 1070 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 KLHL38Q2WGJ6 581 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 TWF2Q6IBS0 349 aaKnown RBP28.65■■■□□ 2.18
CHKB-208ENST00000479003 ADGRD1Q6QNK2 874 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 FAM47EQ6ZV65 393 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 FAM71DQ8N9W8 422 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 FBXO36Q8NEA4 188 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 UBA3Q8TBC4 463 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 CALN1Q9BXU9 219 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 MAK16Q9BXY0 300 aaKnown RBP28.65■■■□□ 2.18
CHKB-208ENST00000479003 ITGA11Q9UKX5 1188 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 GRID1Q9ULK0 1009 aa28.65■■■□□ 2.18
CHKB-208ENST00000479003 NQO1P15559 274 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 CA4P22748 312 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 YARSP54577 528 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 CYP4V2Q6ZWL3 525 aaPredicted RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 ECHDC2Q86YB7 292 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 SPATA18Q8TC71 538 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 MRRFQ96E11 262 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 AGO3Q9H9G7 860 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 PLEKHA5Q9HAU0 1116 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 STARD7Q9NQZ5 370 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 KIAA1257Q9ULG3 409 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 IPPQ9Y573 584 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 C2CD4BA6NLJ0 364 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 ATP6V1G2O95670 118 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 CYP3A5P20815 502 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 NDST1P52848 882 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 RIPK1Q13546 671 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 DPYSL3Q14195 570 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 NOMO1Q15155 1222 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 SLC1A5Q15758 541 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 TRIM71Q2Q1W2 868 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 GLRA4Q5JXX5 417 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 LCLAT1Q6UWP7 414 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 C3orf62Q6ZUJ4 267 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 TTC39CQ8N584 583 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 SMG8Q8ND04 991 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 TRPV6Q9H1D0 765 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 WBP1LQ9NX94 342 aa28.64■■■□□ 2.18
CHKB-208ENST00000479003 XPO7Q9UIA9 1087 aaKnown RBP28.64■■■□□ 2.18
CHKB-208ENST00000479003 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.63■■■□□ 2.17
CHKB-208ENST00000479003 RPLP2P05387 115 aaKnown RBP28.63■■■□□ 2.17
CHKB-208ENST00000479003 RBP5P82980 135 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 DNAJC3Q13217 504 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 EFTUD2Q15029 972 aaKnown RBP eCLIP28.63■■■□□ 2.177e-7■■■■□ 22.4
CHKB-208ENST00000479003 TRNP1Q6NT89 227 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 ALKAL1Q6UXT8 129 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 PDIK1LQ8N165 341 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 ARRDC4Q8NCT1 418 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 FBF1Q8TES7 1133 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 PAFAH2Q99487 392 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 MIS12Q9H081 205 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 PHTF1Q9UMS5 762 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 STIP1P31948 543 aaKnown RBP28.63■■■□□ 2.17
CHKB-208ENST00000479003 RXFP2Q8WXD0 754 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 DPP3Q9NY33 737 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 KLK14Q9P0G3 267 aa28.63■■■□□ 2.17
CHKB-208ENST00000479003 CDH6P55285 790 aa28.62■■■□□ 2.17
CHKB-208ENST00000479003 RNASELQ05823 741 aaKnown RBP28.62■■■□□ 2.17
CHKB-208ENST00000479003 MMRN1Q13201 1228 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms