RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MAP9Q49MG5 647 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 SP5Q6BEB4 398 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-207ENST00000478913 LAYNQ6UX15 382 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 MICALCLQ6ZW33 695 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 TMPRSS9Q7Z410 1059 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 MAML1Q92585 1016 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 ZNF518BQ9C0D4 1074 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 SMOC2Q9H3U7 446 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 SMURF2Q9HAU4 748 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 INTS13Q9NVM9 706 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 TBCCD1Q9NVR7 557 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 CCDC194A0A1B0GVG4 234 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ANO9A1A5B4 782 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 F5H697 171 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ITGAMP11215 1152 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 TOB1P50616 345 aaPredicted RBP6.06□□□□□ -1.44
CCDC171-207ENST00000478913 TFF2Q03403 129 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ABHD18Q0P651 414 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 PICALMQ13492 652 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 BOP1Q14137 746 aaKnown RBP6.06□□□□□ -1.44
CCDC171-207ENST00000478913 C3orf38Q5JPI3 329 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 IGFL4Q6B9Z1 124 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 SESTD1Q86VW0 696 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ARHGEF25Q86VW2 580 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ASB10Q8WXI3 467 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 PHKBQ93100 1093 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 NMD3Q96D46 503 aaKnown RBP6.06□□□□□ -1.44
CCDC171-207ENST00000478913 WDR11Q9BZH6 1224 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 SERHL2Q9H4I8 314 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 PGAP2Q9UHJ9 254 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 CORO2BQ9UQ03 480 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.06□□□□□ -1.44
CCDC171-207ENST00000478913 CDH23Q9H251 3354 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 REV3LO60673 3130 aa6.06□□□□□ -1.44
CCDC171-207ENST00000478913 NCOR2Q9Y618 2525 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 IFT172Q9UG01 1749 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 ACACBO00763 2458 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 A0A0B4J269 797 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 TRIM43BA6NCK2 446 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 FOXN3O00409 490 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 DCLK1O15075 740 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 MYL3P08590 195 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 CYP2C9P11712 490 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 XRCC6P12956 609 aaKnown RBP eCLIP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 SLC5A1P13866 664 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 WNT3P56703 355 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 LOXL3P58215 753 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 RPS16P62249 146 aaKnown RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 TUBB3Q13509 450 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 IL31Q6EBC2 164 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 C11orf96Q7Z7L8 435 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 GPR149Q86SP6 731 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 LCORLQ8N3X6 602 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 FUBP1Q96AE4 644 aaKnown RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 TRIM43Q96BQ3 446 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 PTCD3Q96EY7 689 aaKnown RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 MS4A7Q9GZW8 240 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 SHOC2Q9UQ13 582 aa6.05□□□□□ -1.44
CCDC171-207ENST00000478913 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 DICER1Q9UPY3 1922 aaKnown RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 POLR3AO14802 1390 aaPredicted RBP6.05□□□□□ -1.44
CCDC171-207ENST00000478913 TCF20Q9UGU0 1960 aaKnown RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 PIPSLA2A3N6 862 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 MBD3L4A6NDZ8 208 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 MBD3L3A6NE82 208 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 TMEM233B4DJY2 109 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 TRIAP1O43715 76 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 FZD7O75084 574 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 GATA3P23771 443 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 TM4SF1P30408 202 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 PXNP49023 591 aaPredicted RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 ZNF134P52741 427 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 LILRA4P59901 499 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 SCAPQ12770 1279 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 ABHD17BQ5VST6 288 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 DCAF12L1Q5VU92 463 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 TMEM108Q6UXF1 575 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 MICU3Q86XE3 530 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 PRSS33Q8NF86 280 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 SSH3Q8TE77 659 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 RAPGEF4Q8WZA2 1011 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 UNKQ9C0B0 810 aaKnown RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 PNPLA8Q9NP80 782 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 CASS4Q9NQ75 786 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 A1CFQ9NQ94 594 aaKnown RBP6.04□□□□□ -1.44
CCDC171-207ENST00000478913 ZSCAN32Q9NX65 697 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 COL20A1Q9P218 1284 aa6.04□□□□□ -1.44
CCDC171-207ENST00000478913 MON2Q7Z3U7 1717 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 ZNF609O15014 1411 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 ADM5C9JUS6 153 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 PYCARD-AS1I3L0S3 204 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 EGR2P11161 476 aaPredicted RBP6.03□□□□□ -1.44
CCDC171-207ENST00000478913 KLRC1P26715 233 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 CD6P30203 668 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
CCDC171-207ENST00000478913 PIK3CBP42338 1070 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 NEK3P51956 506 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 BLOC1S1P78537 153 aa6.03□□□□□ -1.44
CCDC171-207ENST00000478913 RBM20Q5T481 1227 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms