RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 E2F5Q15329 346 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 FBXO43Q4G163 708 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 MIIPQ5JXC2 388 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 PM20D1Q6GTS8 502 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 NUDT18Q6ZVK8 323 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 RRAGAQ7L523 313 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 TTC30AQ86WT1 665 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 ARHGEF19Q8IW93 802 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 DTWD2Q8NBA8 298 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 MSANTD4Q8NCY6 345 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 FAM3CQ92520 227 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 CLDN23Q96B33 292 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 ELMO3Q96BJ8 720 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 RSPRY1Q96DX4 576 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 KREMEN1Q96MU8 473 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 CRACR2AQ9BSW2 395 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 SMOC2Q9H3U7 446 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 HEBP1Q9NRV9 189 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 GKN1Q9NS71 199 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 TMEM63CQ9P1W3 806 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 LIMA1Q9UHB6 759 aaKnown RBP8.34□□□□□ -1.07
DDX39B-218ENST00000478365 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 CPQQ9Y646 472 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 COL4A2P08572 1712 aa8.34□□□□□ -1.07
DDX39B-218ENST00000478365 LRRC10BA6NIK2 292 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FAM170BA6NMN3 283 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 LGALS16A8MUM7 142 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CYP26A1O43174 497 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 THAP12O43422 761 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 BEST1O76090 585 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 RARGP13631 454 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 ZNF18P17022 549 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 SLC9A1P19634 815 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 DRD1P21728 446 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CALRP27797 417 aaKnown RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 YWHAGP61981 247 aaKnown RBP eCLIP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 MTA1Q13330 715 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 KRT31Q15323 416 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FILIP1LQ4L180 1135 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 C10orf120Q5SQS8 335 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 BTBD8Q5XKL5 378 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 ZC3H14Q6PJT7 736 aaKnown RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 C11orf57Q6ZUT1 292 aaPredicted RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 RSRC2Q7L4I2 434 aaKnown RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 BEND5Q7L4P6 421 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 ZNF677Q86XU0 584 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 RNF139Q8WU17 664 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 SLC35F5Q8WV83 523 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FAM126AQ9BYI3 521 aaPredicted RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 SMG9Q9H0W8 520 aaKnown RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 SEMA4AQ9H3S1 761 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 ECT2Q9H8V3 914 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 ABCC13Q9NSE7 274 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CFAP97Q9P2B7 532 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 DNAJC12Q9UKB3 198 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FBXO4Q9UKT5 387 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 PCDHGC3Q9UN70 934 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 CCL26Q9Y258 94 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 HBS1LQ9Y450 684 aaKnown RBP8.33□□□□□ -1.08
DDX39B-218ENST00000478365 FAM186AA6NE01 2351 aa8.33□□□□□ -1.08
DDX39B-218ENST00000478365 A0A1W2PQH9 124 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 TRDMT1O14717 391 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 LAMTOR5O43504 91 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ATG13O75143 517 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 LSM8O95777 96 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 LATS1O95835 1130 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 PDGFBP01127 241 aaPredicted RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 GLI1P08151 1106 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 UCHL3P15374 230 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 TARSP26639 723 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 KRT9P35527 623 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 USP8P40818 1118 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 RPL34P49207 117 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ZNF165P49910 485 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 CCR3P51677 355 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 COPB1P53618 953 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 NRLP54845 237 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 VCPP55072 806 aaKnown RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ADIGQ0VDE8 80 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 NNTQ13423 1086 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 RAPGEF1Q13905 1077 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ARHGAP44Q17R89 818 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 EML3Q32P44 896 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ZNF528Q3MIS6 628 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ANO6Q4KMQ2 910 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 KLHDC7AQ5VTJ3 777 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 HTR3DQ70Z44 454 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ZNF771Q7L3S4 317 aaPredicted RBP8.32□□□□□ -1.08
DDX39B-218ENST00000478365 GPRIN1Q7Z2K8 1008 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 ZDHHC17Q8IUH5 632 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 FAM71AQ8IYT1 594 aa8.32□□□□□ -1.08
DDX39B-218ENST00000478365 TMEM105Q8N8V8 129 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms