RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TERB1Q8NA31 727 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 IL17RCQ8NAC3 791 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 MDGA1Q8NFP4 955 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 EDEM2Q9BV94 578 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 MMRN2Q9H8L6 949 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 HMGXB4Q9UGU5 601 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 DNMT3LQ9UJW3 386 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF510Q9Y2H8 683 aa15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF638Q14966 1978 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-209ENST00000478349 KHNYNO15037 678 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 CILPO75339 1184 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 TULP3O75386 442 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF202O95125 648 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 SMC2O95347 1197 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 CD58P19256 250 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 YWHAEP62258 255 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 ORC1Q13415 861 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 CCDC6Q16204 474 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 SPDYCQ5MJ68 293 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 C10orf120Q5SQS8 335 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 HTR3DQ70Z44 454 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 ETFBKMTQ8IXQ9 262 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 PGBD3Q8N328 593 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 C12orf29Q8N999 325 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 ZMIZ2Q8NF64 920 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 JAKMIP2Q96AA8 810 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 DNAJC17Q9NVM6 304 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 POLR3BQ9NW08 1133 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 NAGPAQ9UK23 515 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 MAPK8IP1Q9UQF2 711 aa15.23■□□□□ 0.03
SMARCE1-209ENST00000478349 PTPRDP23468 1912 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 HELZP42694 1942 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 TCRBV21S2A2A0A5A6 115 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 DCLK1O15075 740 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 CYP26A1O43174 497 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 HOXC13P31276 330 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 KIR2DL1P43626 348 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 SLC6A11P48066 632 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 BECN1Q14457 450 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 C1orf220Q5T0J3 134 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 RABEPKQ7Z6M1 372 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 BBS2Q9BXC9 721 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 CLIC5Q9NZA1 410 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 MARK1Q9P0L2 795 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 STRIP2Q9ULQ0 834 aa15.22■□□□□ 0.03
SMARCE1-209ENST00000478349 NEDD8-MDP1E9PL57 170 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 SGK1O00141 431 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 SLC16A3O15427 465 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 AP5Z1O43299 807 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 CACNG3O60359 315 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 BEST1O76090 585 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 RARGP13631 454 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 HOXD12P35452 270 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 P2RY2P41231 377 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 COG7P83436 770 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 LMAN2Q12907 356 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 STIM1Q13586 685 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 SLC36A4Q6YBV0 504 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF276Q8N554 614 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 NAT16Q8N8M0 369 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 OLIG1Q8TAK6 271 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 HEXIM2Q96MH2 286 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 GSDMAQ96QA5 445 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 KLF16Q9BXK1 252 aaPredicted RBP15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 DCLK3Q9C098 648 aa15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMARCE1-209ENST00000478349 ZNF217O75362 1048 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 HOXB2P14652 356 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TYRP14679 529 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 NTSR1P30989 418 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 CHKAP35790 457 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 DGKGP49619 791 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 KIF11P52732 1056 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TMEM92Q6UXU6 159 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 RSRC2Q7L4I2 434 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TMEM25Q86YD3 366 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 CHPFQ8IZ52 775 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 PHTF2Q8N3S3 785 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 ELMO3Q96BJ8 720 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TMEM176AQ96HP8 235 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 NUSAP1Q9BXS6 441 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 UBXN6Q9BZV1 441 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 TMEM9BQ9NQ34 198 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 RAB20Q9NX57 234 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 EVLQ9UI08 416 aaPredicted RBP15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms