RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
PABPC4-212ENST00000477556 EVLQ9UI08 416 aaPredicted RBP13.87□□□□□ -0.19
PABPC4-212ENST00000477556 LSM7Q9UK45 103 aaKnown RBP13.87□□□□□ -0.19
PABPC4-212ENST00000477556 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 IKBKBO14920 756 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 BEST1O76090 585 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 KIF20AO95235 890 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 ASS1P00966 412 aaKnown RBP13.86□□□□□ -0.19
PABPC4-212ENST00000477556 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 MYL1P05976 194 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 HOXB2P14652 356 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 CSRP1P21291 193 aaKnown RBP13.86□□□□□ -0.19
PABPC4-212ENST00000477556 ADORA2BP29275 332 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 ATP5C1P36542 298 aaKnown RBP13.86□□□□□ -0.19
PABPC4-212ENST00000477556 ZNF252P-AS1Q0IIN9 211 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 UAP1L1Q3KQV9 507 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 LYSMD4Q5XG99 296 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 GRAMD4Q6IC98 578 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 SDE2Q6IQ49 451 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 HTR3DQ70Z44 454 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 TMEFF1Q8IYR6 380 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 C12orf29Q8N999 325 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 WBP2Q969T9 261 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 DNAI2Q9GZS0 605 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 DNAJC17Q9NVM6 304 aaKnown RBP13.86□□□□□ -0.19
PABPC4-212ENST00000477556 HMGXB4Q9UGU5 601 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
PABPC4-212ENST00000477556 MYO18AQ92614 2054 aaKnown RBP13.86□□□□□ -0.19
PABPC4-212ENST00000477556 CDX4O14627 284 aaPredicted RBP13.85□□□□□ -0.19
PABPC4-212ENST00000477556 GIPC1O14908 333 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 AP5Z1O43299 807 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 TBX18O95935 607 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 CEACAM1P13688 526 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 NTSR1P30989 418 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 PTGER3P43115 390 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 ASPAP45381 313 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 VAMP7P51809 220 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 SPOPLQ6IQ16 392 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 HNRNPABQ99729 332 aaKnown RBP13.85□□□□□ -0.19
PABPC4-212ENST00000477556 BBS2Q9BXC9 721 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 NT5C1AQ9BXI3 368 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
PABPC4-212ENST00000477556 CYP3A43Q9HB55 503 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 CYLDQ9NQC7 956 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■■■■ 76.1
PABPC4-212ENST00000477556 WDR35Q9P2L0 1181 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 MBD1Q9UIS9 605 aaPredicted RBP13.85□□□□□ -0.19
PABPC4-212ENST00000477556 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 PCDHA5Q9Y5H7 936 aa13.85□□□□□ -0.19
PABPC4-212ENST00000477556 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
PABPC4-212ENST00000477556 MYH10P35580 1976 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 A0A1B0GVL5 298 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 NEDD8-MDP1E9PL57 170 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 MAPK13O15264 365 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CACNG3O60359 315 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 KRT13P13646 458 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 TYRP14679 529 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 PFKFB1P16118 471 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 ACO1P21399 889 aaKnown RBP13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CMA1P23946 247 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 HOXD12P35452 270 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 WASP42768 502 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 PLA2G4AP47712 749 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 PGFP49763 221 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 RPL6Q02878 288 aaKnown RBP13.84□□□□□ -0.19
PABPC4-212ENST00000477556 INCA1Q0VD86 236 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 FOXC1Q12948 553 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 PKP1Q13835 747 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 TPGS1Q6ZTW0 290 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CLEC20AQ6ZU45 233 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 INTS8Q75QN2 995 aaKnown RBP13.84□□□□□ -0.19
PABPC4-212ENST00000477556 TADA2BQ86TJ2 420 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CHPFQ8IZ52 775 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 FRMD1Q8N878 549 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 PNPLA8Q9NP80 782 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 GON4LQ3T8J9 2241 aa13.84□□□□□ -0.19
PABPC4-212ENST00000477556 TRIM24O15164 1050 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 CYP26A1O43174 497 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 RARGP13631 454 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 ENGP17813 658 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 GABRG2P18507 467 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 NR2F2P24468 414 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 SYKP43405 635 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 MAPK8P45983 427 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 PSEN1P49768 467 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 ATXN3P54252 364 aaPredicted RBP13.83□□□□□ -0.2
PABPC4-212ENST00000477556 NFIL3Q16649 462 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 C1orf220Q5T0J3 134 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 EGFLAMQ63HQ2 1017 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 KLHDC10Q6PID8 442 aa13.83□□□□□ -0.2
PABPC4-212ENST00000477556 SLC23A3Q6PIS1 610 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms