RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NMUR1Q9HB89 426 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 MYO16Q9Y6X6 1858 aa13.77□□□□□ -0.21
TOP3A-205ENST00000477508 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 E5RJQ4 531 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 E7ENQ6 273 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 PI4K2BG5E9Z4 385 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 RIOK3O14730 519 aaKnown RBP13.76□□□□□ -0.21
TOP3A-205ENST00000477508 ZNF263O14978 683 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CHADO15335 359 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 GABBR2O75899 941 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-205ENST00000477508 PRKCIP41743 596 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 ZXDAP98168 799 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 FMO1Q01740 532 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 EFHC1Q5JVL4 640 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-205ENST00000477508 TOGARAM2Q6ZUX3 1019 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 ERICH1Q86X53 443 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 GAS2L3Q86XJ1 694 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 DNASE1L2Q92874 299 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 RPP25Q9BUL9 199 aaKnown RBP13.76□□□□□ -0.21
TOP3A-205ENST00000477508 PLA2G2FQ9BZM2 168 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 OSER1Q9NX31 292 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 STRIP2Q9ULQ0 834 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 CPQQ9Y646 472 aa13.76□□□□□ -0.21
TOP3A-205ENST00000477508 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 SLC9A3R1O14745 358 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 PAPSS1O43252 624 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 LTFP02788 710 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 CYP1A1P04798 512 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 GYPCP04921 128 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 CHRNB2P17787 502 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 GDI1P31150 447 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 SCNN1AP37088 669 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 GABRB2P47870 512 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 PGFP49763 221 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 KPNA1P52294 538 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 NOMO3P69849 1222 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 COG7P83436 770 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 USP4Q13107 963 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 PDGFRLQ15198 375 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 ZNF77Q15935 545 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 TSR1Q2NL82 804 aaKnown RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 BHLHA9Q7RTU4 235 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 SH3RF2Q8TEC5 729 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 SLC20A1Q8WUM9 679 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 RSPRY1Q96DX4 576 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 SMG9Q9H0W8 520 aaKnown RBP13.75□□□□□ -0.21
TOP3A-205ENST00000477508 TMEM51Q9NW97 253 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 ASNSD1Q9NWL6 643 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 CCL26Q9Y258 94 aa13.75□□□□□ -0.21
TOP3A-205ENST00000477508 E2F8A0AVK6 867 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 LEFTY2O00292 366 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 PIK3R2O00459 728 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 MLLT6P55198 1093 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 YWHAZP63104 245 aaKnown RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 GPC5P78333 572 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 GRM2Q14416 872 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 MTF1Q14872 753 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 PTPN20Q4JDL3 420 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 NAA35Q5VZE5 725 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 MSANTD2Q6P1R3 559 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 VPS36Q86VN1 386 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 DRC7Q8IY82 874 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 ST13P5Q8NFI4 369 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 NDRG1Q92597 394 aaKnown RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 FAM149B1Q96BN6 582 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 MRFAP1L1Q96HT8 127 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 SHDQ96IW2 340 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 LRRC3BQ96PB8 259 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 POPDC2Q9HBU9 364 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 TBC1D14Q9P2M4 693 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 LSM7Q9UK45 103 aaKnown RBP13.74□□□□□ -0.21
TOP3A-205ENST00000477508 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
TOP3A-205ENST00000477508 HELZP42694 1942 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CAPN9O14815 690 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 HSF2BPO75031 334 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 TBX18O95935 607 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 SERPING1P05155 500 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 UNGP13051 313 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 GLULP15104 373 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 MMP8P22894 467 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms