RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 OSTM1Q86WC4 334 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 UBR7Q8N806 425 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 TTC8Q8TAM2 541 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 KBTBD7Q8WVZ9 684 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 SHC3Q92529 594 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 SPAG5Q96R06 1193 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 CISHQ9NSE2 258 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 CAPN11Q9UMQ6 739 aa12.23□□□□□ -0.45
LSM2-212ENST00000477182 LUC7L2Q9Y383 392 aaKnown RBP12.23□□□□□ -0.45
LSM2-212ENST00000477182 KIF26AQ9ULI4 1882 aaPredicted RBP12.23□□□□□ -0.45
LSM2-212ENST00000477182 ATG2BQ96BY7 2078 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 THADAQ6YHU6 1953 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 F8VZ95 297 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 HCRTO43612 131 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 TACC1O75410 805 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 SEC24AO95486 1093 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 CYP11A1P05108 521 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 GJA1P17302 382 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 TYMPP19971 482 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 WARSP23381 471 aaKnown RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 KRT9P35527 623 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ADKP55263 362 aaKnown RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 ARPP19P56211 112 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ZBED6P86452 979 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 TWF1Q12792 350 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 PKN3Q6P5Z2 889 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 TMEM270Q6UE05 265 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 DPH6Q7L8W6 267 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 CYP2U1Q7Z449 544 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ARID3BQ8IVW6 561 aaPredicted RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 OR6B3Q8NGW1 331 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 SHKBP1Q8TBC3 707 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 ADAM32Q8TC27 787 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 JAKMIP2Q96AA8 810 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 RSPRY1Q96DX4 576 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 SNX25Q9H3E2 840 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 CACNA2D2Q9NY47 1150 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 IMPACTQ9P2X3 320 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 HMGXB4Q9UGU5 601 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 EBF1Q9UH73 591 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 EVLQ9UI08 416 aaPredicted RBP12.22□□□□□ -0.45
LSM2-212ENST00000477182 DSEQ9UL01 958 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 NME7Q9Y5B8 376 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 BPTFQ12830 3046 aa12.22□□□□□ -0.45
LSM2-212ENST00000477182 PTPRDP23468 1912 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 NUP210Q8TEM1 1887 aaPredicted RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 GOLGA6L6A8MZA4 724 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 UPK3BL1B0FP48 263 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 AKR1B15C9JRZ8 316 aaPredicted RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 UPK3BL2E5RIL1 263 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 SYN3O14994 580 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 DCLK1O15075 740 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 MFAP3LO75121 409 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 CILPO75339 1184 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 GFPT2O94808 682 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 APBB3O95704 486 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 CALCAP01258 141 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 PDGFRBP09619 1106 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 SOX5P35711 763 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 GNL1P36915 607 aaPredicted RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 STAT1P42224 750 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 NDST1P52848 882 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 IRX4P78413 519 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 AMPD2Q01433 879 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ARID5AQ03989 594 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 SCAPQ12770 1279 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ORC1Q13415 861 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ZNF423Q2M1K9 1284 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 TMEM196Q5HYL7 178 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 PMS2CLQ68D20 193 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 OVOS1Q6IE37 1185 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 FAM71AQ8IYT1 594 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 RBBP8NLQ8NC74 664 aaPredicted RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 WHAMMQ8TF30 809 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 BBC3Q96PG8 261 aaPredicted RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 HHIPQ96QV1 700 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 TWNKQ96RR1 684 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 NUSAP1Q9BXS6 441 aaKnown RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 THG1LQ9NWX6 298 aaKnown RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 AFF4Q9UHB7 1163 aaKnown RBP12.21□□□□□ -0.45
LSM2-212ENST00000477182 MYO6Q9UM54 1294 aa12.21□□□□□ -0.45
LSM2-212ENST00000477182 ABCA7Q8IZY2 2146 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 NAV2Q8IVL1 2488 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 SPAARA0A1B0GVQ0 90 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms