RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 RGL4Q8IZJ4 473 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 CRELD1Q96HD1 420 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 KRT82Q9NSB4 513 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 GPSM3Q9Y4H4 160 aa12.69□□□□□ -0.38
HDAC6-219ENST00000476625 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-219ENST00000476625 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 KCNJ18B7U540 433 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 TYRP14679 529 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 PPP3CCP48454 512 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 BNC1Q01954 994 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 GRIK2Q13002 908 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 PSMD6Q15008 389 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 HSF5Q4G112 596 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 SOWAHCQ53LP3 525 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 BTBD8Q5XKL5 378 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 GRAMD4Q6IC98 578 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 CCDC73Q6ZRK6 1079 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 NAXDQ8IW45 347 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 CCDC65Q8IXS2 484 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 FUKQ8N0W3 1084 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 MRGPRX1Q96LB2 322 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-219ENST00000476625 BBS2Q9BXC9 721 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 BLZF1Q9H2G9 400 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 FAM49BQ9NUQ9 324 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 TBC1D14Q9P2M4 693 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 PLXNA2O75051 1894 aa12.68□□□□□ -0.38
HDAC6-219ENST00000476625 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 UPK3BL1B0FP48 263 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 UPK3BL2E5RIL1 263 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 CYP26A1O43174 497 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 AP1G2O75843 785 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 VNN1O95497 513 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 ZDHHC11BP0C7U3 371 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 TXLNAP40222 546 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 MAP3K7CLP57077 242 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 ASIC1P78348 528 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 ALCAMQ13740 583 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 E2F4Q16254 413 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 SPOPLQ6IQ16 392 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 DDX42Q86XP3 938 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 ZCCHC9Q8N567 271 aaKnown RBP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 SCFD1Q8WVM8 642 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 HNRNPLLQ8WVV9 542 aaKnown RBP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 DHX58Q96C10 678 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 TWNKQ96RR1 684 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 GABRG3Q99928 467 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 KLF16Q9BXK1 252 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 NMUR1Q9HB89 426 aa12.67□□□□□ -0.38
HDAC6-219ENST00000476625 DNAAF2Q9NVR5 837 aaKnown RBP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-219ENST00000476625 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 FAM221BA6H8Z2 402 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 TLR5O60602 858 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 RTN3O95197 1032 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-219ENST00000476625 CISD3P0C7P0 127 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SYT1P21579 422 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 ADORA2BP29275 332 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 DLG4P78352 724 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 TRPC3Q13507 836 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SURF1Q15526 300 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 PDZD3Q86UT5 571 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 GRAMD1CQ8IYS0 662 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 PDZD8Q8NEN9 1154 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 CEP76Q8TAP6 659 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 SLC2A14Q8TDB8 520 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 GPR174Q9BXC1 333 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 NACA2Q9H009 215 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 MIR1-1HGQ9H1L0 117 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 DMAP1Q9NPF5 467 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-219ENST00000476625 IL37Q9NZH6 218 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 EHD2Q9NZN4 543 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 CLEC4EQ9ULY5 219 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
HDAC6-219ENST00000476625 LRRIQ3A6PVS8 624 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 CACNG3O60359 315 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 PHACTR2O75167 634 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 NDUFS2O75306 463 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 HMBSP08397 361 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 IL12RB1P42701 662 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 DGKGP49619 791 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 BIRC3Q13489 604 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
HDAC6-219ENST00000476625 GEN1Q17RS7 908 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 FUT11Q495W5 492 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 FAM26FQ5R3K3 315 aa12.65□□□□□ -0.38
HDAC6-219ENST00000476625 LAYNQ6UX15 382 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms