RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRKCBP05771 671 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 FESP07332 822 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 YY1P25490 414 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 DGCR2P98153 550 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 EFEMP1Q12805 493 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 TBCCQ15814 346 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 CYP1B1Q16678 543 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 AASDHQ4L235 1098 aaPredicted RBP6.85□□□□□ -1.31
VPS50-212ENST00000476413 TREML2Q5T2D2 321 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 ATPAF1Q5TC12 328 aaPredicted RBP6.85□□□□□ -1.31
VPS50-212ENST00000476413 FAM90A2PQ658T7 463 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 GRHL2Q6ISB3 625 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 RRAGAQ7L523 313 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 RAB11FIP2Q7L804 512 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 MRGPREQ86SM8 312 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 LRRTM4Q86VH4 590 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 CSGALNACT1Q8TDX6 532 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 RFKQ969G6 155 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 PLEKHG4BQ96PX9 1271 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 TRAPPC9Q96Q05 1148 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 PAAF1Q9BRP4 392 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 VPS45Q9NRW7 570 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 STEAP1Q9UHE8 339 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 GABRQQ9UN88 632 aa6.85□□□□□ -1.31
VPS50-212ENST00000476413 PIPSLA2A3N6 862 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 M0QZQ0 153 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 YY2O15391 372 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 SPRY2O43597 315 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 FOXD2O60548 495 aaPredicted RBP6.84□□□□□ -1.31
VPS50-212ENST00000476413 ITGAMP11215 1152 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 ITPKBP27987 946 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 MTHFSP49914 203 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 CTSWP56202 376 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 KIAA0895LQ68EN5 471 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 DPY19L3Q6ZPD9 716 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 TRABD2AQ86V40 505 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 C2CD5Q86YS7 1000 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 TMTC1Q8IUR5 882 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 PAF1Q8N7H5 531 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 TOR1AIP2Q8NFQ8 470 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 OR6Y1Q8NGX8 325 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 SDCCAG3Q96C92 435 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 PGBD1Q96JS3 809 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 PYM1Q9BRP8 204 aaKnown RBP6.84□□□□□ -1.31
VPS50-212ENST00000476413 MECRQ9BV79 373 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 TAF1DQ9H5J8 278 aaPredicted RBP6.84□□□□□ -1.31
VPS50-212ENST00000476413 G6PC2Q9NQR9 355 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 KLC4Q9NSK0 619 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 PNMA2Q9UL42 364 aa6.84□□□□□ -1.31
VPS50-212ENST00000476413 C19orf53Q9UNZ5 99 aaPredicted RBP6.84□□□□□ -1.31
VPS50-212ENST00000476413 A8MVJ9 347 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 KIF28PB7ZC32 967 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 CTIFO43310 598 aaKnown RBP6.83□□□□□ -1.32
VPS50-212ENST00000476413 TK1P04183 234 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 POLBP06746 335 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 CYP21A2P08686 494 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 MCM5P33992 734 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 EIF4A1P60842 406 aaKnown RBP6.83□□□□□ -1.32
VPS50-212ENST00000476413 CSHL1Q14406 222 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 KCNJ12Q14500 433 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 PTPRRQ15256 657 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 TAF12Q16514 161 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 TXNRD1Q16881 649 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 ADCK5Q3MIX3 580 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 ZNF618Q5T7W0 954 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 FNDC7Q5VTL7 733 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 SYNE4Q8N205 404 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 AFG1LQ8WV93 481 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 WDR60Q8WVS4 1066 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 ZNF503Q96F45 646 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 Q96MF0 132 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 PRR25Q96S07 402 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 ALG8Q9BVK2 526 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 SERHL2Q9H4I8 314 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 ELAC1Q9H777 363 aaKnown RBP6.83□□□□□ -1.32
VPS50-212ENST00000476413 RIC8AQ9NPQ8 531 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 SH2B3Q9UQQ2 575 aa6.83□□□□□ -1.32
VPS50-212ENST00000476413 LOC105369274A0A096LPK9 316 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 LOC102723532A0A0G2JNH3 316 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 FAM90A20PA6NIJ5 464 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 KIAA0355O15063 1070 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 CHRM2P08172 466 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 TMEM225BP0DP42 221 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 CD19P15391 556 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 CNTFP26441 200 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 CDK7P50613 346 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 GALNTL6Q49A17 601 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 TEDDM1Q5T9Z0 273 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 ABHD17BQ5VST6 288 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 OR4N4Q8N0Y3 316 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 SLC22A17Q8WUG5 538 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 HAS1Q92839 578 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 PBKQ96KB5 322 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 AIFM2Q9BRQ8 373 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms