RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.01
VAPB-205ENST00000476395 A0A0B4J269 797 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 WNT10BO00744 389 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 HNRNPDLO14979 420 aaKnown RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 GAS8O95995 478 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 VDRP11473 427 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 MYCLP12524 364 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 CRABP2P29373 138 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 GNA15P30679 374 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 SSTR1P30872 391 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 SFNP31947 248 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 NSFP46459 744 aaKnown RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 ARSEP51690 589 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 TAF5Q15542 800 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 C1orf146Q5VVC0 180 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 FKBP1CQ5VVH2 108 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 ULK2Q8IYT8 1036 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 BANPQ8N9N5 519 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 STKLD1Q8NE28 680 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 MIPOL1Q8TD10 442 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 TCP10LQ8TDR4 215 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 SKA1Q96BD8 255 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 PCYT2Q99447 389 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 VPS37BQ9H9H4 285 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 C17orf75Q9HAS0 396 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 DRG1Q9Y295 367 aaKnown RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 PCDHA10Q9Y5I2 948 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 VWA5AO00534 786 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 WDR46O15213 610 aaKnown RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 ITGAVP06756 1048 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 ALOX15P16050 662 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 CDH5P33151 784 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 STT3AP46977 705 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 RXRGP48443 463 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 ARFIP2P53365 341 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 VCPP55072 806 aaKnown RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 KRT76Q01546 638 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 CD300CQ08708 224 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 TFDP1Q14186 410 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 MYLK3Q32MK0 819 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 TRNP1Q6NT89 227 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 NCCRP1Q6ZVX7 275 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 FAM83AQ86UY5 434 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 SLC15A3Q8IY34 581 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 CHCHD4Q8N4Q1 142 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 POU5F2Q8N7G0 328 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 NIPA2Q8N8Q9 360 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 CEP170P1Q96L14 293 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 MECRQ9BV79 373 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 OXCT2Q9BYC2 517 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 POLR3FQ9H1D9 316 aaPredicted RBP8.71□□□□□ -1.02
VAPB-205ENST00000476395 APPL1Q9UKG1 709 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 ADAMTS5Q9UNA0 930 aa8.71□□□□□ -1.02
VAPB-205ENST00000476395 TMX2-CTNND1H3BSU7 103 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CCDC166P0CW27 439 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 VCLP18206 1134 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 BGNP21810 368 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 SLC5A2P31639 672 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ARL2P36404 184 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 PRKCEQ02156 737 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 GPS1Q13098 491 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 BAATQ14032 418 aaPredicted RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 MAP7Q14244 749 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 RALGPS1Q5JS13 557 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 KAZNQ674X7 775 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 SWSAP1Q6NVH7 229 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ATG14Q6ZNE5 492 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ZBTB46Q86UZ6 589 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 PDSS2Q86YH6 399 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 TMPRSS6Q8IU80 811 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 SERAC1Q96JX3 654 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CORO1BQ9BR76 489 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 INO80BQ9C086 356 aaPredicted RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 SAR1AQ9NR31 198 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 C1orf112Q9NSG2 853 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 EXOC7Q9UPT5 735 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 USTQ9Y2C2 406 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 AFG3L2Q9Y4W6 797 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 C15orf38-AP3S2A0A0A6YYH1 394 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CAPN8A6NHC0 703 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 DNAJC6O75061 913 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 NELFEP18615 380 aaKnown RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 SLC25A3Q00325 362 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
VAPB-205ENST00000476395 MORF4L2Q15014 288 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 PDK3Q15120 406 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 SPDYAQ5MJ70 313 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CDHR3Q6ZTQ4 885 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 CCDC80Q76M96 950 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ARPINQ7Z6K5 226 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ZNF554Q86TJ5 538 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 ZBED8Q8IZ13 594 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 JOSD2Q8TAC2 188 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 PPP2R3CQ969Q6 453 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 TMEM143Q96AN5 459 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 MCEEQ96PE7 176 aa8.7□□□□□ -1.02
VAPB-205ENST00000476395 DHX33Q9H6R0 707 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms