RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SORBS2O94875 1100 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TFE3P19532 575 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 OCRLQ01968 901 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NR1H3Q13133 447 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 HIC1Q14526 733 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NRF1Q16656 503 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GOLGA7BQ2TAP0 167 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MSS51Q4VC12 460 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 KHDC1Q4VXA5 237 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 LGSNQ5TDP6 509 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TWF2Q6IBS0 349 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FAM160B2Q86V87 743 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RASAL3Q86YV0 1011 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PYROXD2Q8N2H3 581 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GSTCDQ8NEC7 633 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MCPH1Q8NEM0 835 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NPLOC4Q8TAT6 608 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MIEF2Q96C03 454 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PIWIL1Q96J94 861 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GCNAQ96QF7 691 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NMUR2Q9GZQ4 415 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NACA2Q9H009 215 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PRDM5Q9NQX1 630 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PXMP2Q9NR77 195 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NDE1Q9NXR1 346 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FLRT1Q9NZU1 646 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SEL1LQ9UBV2 794 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF711Q9Y462 761 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 EIF3DO15371 548 aaKnown RBP eCLIP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MT-ND1P03886 318 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PROCP04070 461 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SKIP12755 728 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 EEF1B2P24534 225 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ARL4AP40617 200 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 JAK3P52333 1124 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 STAT4Q14765 748 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 Q4G0T1 1027 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TRMT10BQ6PF06 316 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 VSTM1Q6UX27 236 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RPS27LQ71UM5 84 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 BZW1Q7L1Q6 419 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RAET1EQ8TD07 263 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FAM172AQ8WUF8 416 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SCG3Q8WXD2 468 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF516Q92618 1163 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 C20orf96Q9NUD7 363 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PGAP2Q9UHJ9 254 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 APOBEC2Q9Y235 224 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PIN4Q9Y237 131 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MFHAS1Q9Y4C4 1052 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SNX10Q9Y5X0 201 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FRMPD4Q14CM0 1322 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MROH7Q68CQ1 1323 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ZMYM2Q9UBW7 1377 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 H0YGN5 161 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CLDN5O00501 218 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CLGNO14967 610 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ICAM1P05362 532 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PIRTP0C851 137 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SYN1P17600 705 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 OSBPP22059 807 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RPL22P35268 128 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NUDT2P50583 147 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GEMIN4P57678 1058 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PLCB4Q15147 1175 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DLG2Q15700 870 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CATSPERGQ6ZRH7 1159 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FAM228AQ86W67 206 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FAM13CQ8NE31 585 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 IPMKQ8NFU5 416 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CLEC4CQ8WTT0 213 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF296Q8WUU4 475 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 E2F7Q96AV8 911 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DNAJC1Q96KC8 554 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 OSMRQ99650 979 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 EBF4Q9BQW3 602 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TRPV6Q9H1D0 765 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DENND2DQ9H6A0 471 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ACAD9Q9H845 621 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CHST12Q9NRB3 414 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ZDHHC18Q9NUE0 388 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 USP18Q9UMW8 372 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 NFS1Q9Y697 457 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 RPS6KL1Q9Y6S9 549 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SH3BGRLO75368 114 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MYL3P08590 195 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TAC1P20366 129 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FECHP22830 423 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PRKCIP41743 596 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PTGIRP43119 386 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MMP13P45452 471 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 KLC1Q07866 573 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ART3Q13508 389 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 TFDP3Q5H9I0 405 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ATF7IP2Q5U623 682 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MAP7D3Q8IWC1 876 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 KIAA0319LQ8IZA0 1049 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 ABRAQ8N0Z2 381 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms