RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 C8orf48Q96LL4 319 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 KIF2CQ99661 725 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 MKRN2Q9H000 416 aaKnown RBP10.61□□□□□ -0.71
SNX5-208ENST00000475716 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 SH3BP1Q9Y3L3 701 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 PCDHGB2Q9Y5G2 931 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 SNX11Q9Y5W9 270 aa10.61□□□□□ -0.71
SNX5-208ENST00000475716 KNTC1P50748 2209 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 NEDD8-MDP1E9PL57 170 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 CLDN5O00501 218 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 HLA-EP13747 358 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 SCP2P22307 547 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 TPMTP51580 245 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 SUZ12Q15022 739 aaKnown RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 FUT11Q495W5 492 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 PREPLQ4J6C6 727 aaPredicted RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 KCNT1Q5JUK3 1230 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 IL27RAQ6UWB1 636 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 LRRC69Q6ZNQ3 347 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 TPGS1Q6ZTW0 290 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 HS2ST1Q7LGA3 356 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNX5-208ENST00000475716 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 LSM14AQ8ND56 463 aaKnown RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 CADM4Q8NFZ8 388 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 SCAMP5Q8TAC9 235 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 SCFD1Q8WVM8 642 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 OTUB2Q96DC9 234 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 CEP295NLQ96MC4 621 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 KCNK16Q96T55 309 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 MRPL45Q9BRJ2 306 aaKnown RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 MTMR12Q9C0I1 747 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 USP36Q9P275 1121 aaKnown RBP10.6□□□□□ -0.71
SNX5-208ENST00000475716 STON1Q9Y6Q2 735 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 CABIN1Q9Y6J0 2220 aa10.6□□□□□ -0.71
SNX5-208ENST00000475716 PTPRQQ9UMZ3 2332 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 MYH11P35749 1972 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 CBX4O00257 560 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 CAPN9O14815 690 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 GREM1O60565 184 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 TBX18O95935 607 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 TYRP14679 529 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 JUPP14923 745 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 WARSP23381 471 aaKnown RBP10.59□□□□□ -0.71
SNX5-208ENST00000475716 YWHAQP27348 245 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 GNL1P36915 607 aaPredicted RBP10.59□□□□□ -0.71
SNX5-208ENST00000475716 ANAPC15P60006 121 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 IL9RQ01113 521 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 POSTNQ15063 836 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 SF3A1Q15459 793 aaKnown RBP10.59□□□□□ -0.71
SNX5-208ENST00000475716 PRAMEF14Q5SWL7 426 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 HECTD3Q5T447 861 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 LAYNQ6UX15 382 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 DPH6Q7L8W6 267 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 FAM124AQ86V42 546 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 TMPRSS6Q8IU80 811 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 BRSK2Q8IWQ3 736 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 OR5B17Q8NGF7 314 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 NOC3LQ8WTT2 800 aaKnown RBP10.59□□□□□ -0.71
SNX5-208ENST00000475716 BHMTQ93088 406 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 HPDLQ96IR7 371 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 SLITRK1Q96PX8 696 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 B3GNT5Q9BYG0 378 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 ZNF518BQ9C0D4 1074 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 DPEP3Q9H4B8 488 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 PCIF1Q9H4Z3 704 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 RBAKQ9NYW8 714 aaPredicted RBP10.59□□□□□ -0.71
SNX5-208ENST00000475716 PLK2Q9NYY3 685 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 EHD2Q9NZN4 543 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 ITGA11Q9UKX5 1188 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 ANKRD6Q9Y2G4 727 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 NFE2L3Q9Y4A8 694 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 AK5Q9Y6K8 562 aa10.59□□□□□ -0.71
SNX5-208ENST00000475716 PTPRJQ12913 1337 aa10.58□□□□□ -0.71
SNX5-208ENST00000475716 H0Y8X5 98 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 CACNG3O60359 315 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 PTPN1P18031 435 aaKnown RBP10.58□□□□□ -0.72
SNX5-208ENST00000475716 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
SNX5-208ENST00000475716 TARDBPQ13148 414 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNX5-208ENST00000475716 MAPRE1Q15691 268 aaKnown RBP10.58□□□□□ -0.72
SNX5-208ENST00000475716 HTR3DQ70Z44 454 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 GPR155Q7Z3F1 870 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 CACUL1Q86Y37 369 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 LURAP1LQ8IV03 231 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 NUP93Q8N1F7 819 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 FBXO32Q969P5 355 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 SIPA1Q96FS4 1042 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 XPO6Q96QU8 1125 aaKnown RBP10.58□□□□□ -0.72
SNX5-208ENST00000475716 MMS19Q96T76 1030 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 STRA6Q9BX79 667 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 BBS2Q9BXC9 721 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 ST6GALNAC4Q9H4F1 302 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 C6orf106Q9H6K1 298 aaPredicted RBP10.58□□□□□ -0.72
SNX5-208ENST00000475716 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 DNMT3LQ9UJW3 386 aa10.58□□□□□ -0.72
SNX5-208ENST00000475716 E9PAM4 449 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms