RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 RHBDF2Q6PJF5 856 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 FAM114A1Q8IWE2 563 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 NAT16Q8N8M0 369 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 EDEM1Q92611 657 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 CD101Q93033 1021 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 VPS16Q9H269 839 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 APEX2Q9UBZ4 518 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 DNMT3LQ9UJW3 386 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 DNAJC12Q9UKB3 198 aa13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 ZNF638Q14966 1978 aaKnown RBP13.83□□□□□ -0.2
NIPAL3-206ENST00000475663 E2F8A0AVK6 867 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 YJEFN3A6XGL0 299 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 E7ENQ6 273 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 TRDMT1O14717 391 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 THAP12O43422 761 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 GREM1O60565 184 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 RNF40O75150 1001 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 MBD3O95983 291 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 RALAP11233 206 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 SEC13P55735 322 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 KDSRQ06136 332 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 DMWDQ09019 674 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 KCNMA1Q12791 1236 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 GRSF1Q12849 480 aaKnown RBP eCLIP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 NR1H3Q13133 447 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 RSRC2Q7L4I2 434 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 TMEM25Q86YD3 366 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 SIX6OS1Q8N1H7 587 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 ENOX1Q8TC92 643 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 SLC35F5Q8WV83 523 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 BHMTQ93088 406 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 MIS12Q9H081 205 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 FANCLQ9NW38 375 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 CNTN6Q9UQ52 1028 aa13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 KIF26AQ9ULI4 1882 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-206ENST00000475663 SLC12A8A0AV02 714 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 SLC9A3R1O14745 358 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 TRIM24O15164 1050 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 KLKB1P03952 638 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 SETSIPP0DME0 302 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ADH5P11766 374 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 NBL1P41271 181 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 MAGEA9P43362 315 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 PXNP49023 591 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 KLK7P49862 253 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 STX1AQ16623 288 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ANO4Q32M45 955 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 DGKKQ5KSL6 1271 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 PM20D1Q6GTS8 502 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 DPY19L2P1Q6NXN4 242 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 PASD1Q8IV76 773 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ZNF606Q8WXB4 792 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 LSM14BQ9BX40 385 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 ANO10Q9NW15 660 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 SFMBT1Q9UHJ3 866 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 CYTH4Q9UIA0 394 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
NIPAL3-206ENST00000475663 CACNA1IQ9P0X4 2223 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 MYH10P35580 1976 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 FOXN3O00409 490 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 MSI1O43347 362 aaKnown RBP13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 GFRA3O60609 400 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 STC2O76061 302 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 GNA15P30679 374 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 GPD2P43304 727 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 CXCL12P48061 93 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 DAOAP59103 153 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 TYRO3Q06418 890 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 KRT31Q15323 416 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 C1orf228Q6PIY5 440 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 SPEM1Q8N4L4 309 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 RPLP0P6Q8NHW5 317 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 SHC3Q92529 594 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 P2RY11Q96G91 374 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 PRMT8Q9NR22 394 aaPredicted RBP13.8□□□□□ -0.2
NIPAL3-206ENST00000475663 PLK2Q9NYY3 685 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms