RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 SMCR8Q8TEV9 937 aaPredicted RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 CHURC1Q8WUH1 139 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 ATRIPQ8WXE1 791 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 CTNNBL1Q8WYA6 563 aaPredicted RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 HPS3Q969F9 1004 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 CAVIN3Q969G5 261 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 MIEF2Q96C03 454 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 GPR101Q96P66 508 aaPredicted RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 PSMB7Q99436 277 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 KRT12Q99456 494 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 LRRC1Q9BTT6 524 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 MMTAG2Q9BU76 263 aaKnown RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 ANO3Q9BYT9 981 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 RAB17Q9H0T7 212 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 STMN4Q9H169 189 aaPredicted RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 EPB41L5Q9HCM4 733 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 BLOC1S4Q9NUP1 217 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 TYW1Q9NV66 732 aaKnown RBP4.5□□□□□ -1.69
RBM39-229ENST00000475651 AIPL1Q9NZN9 384 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 NYAP2Q9P242 653 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 AMFRQ9UKV5 643 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 INTUQ9ULD6 942 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 VWA7Q9Y334 891 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 RABGAP1Q9Y3P9 1069 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 NUP98P52948 1817 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 PLIN4Q96Q06 1357 aa4.5□□□□□ -1.69
RBM39-229ENST00000475651 UBE4BO95155 1302 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PLCH1Q4KWH8 1693 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 A0A087WUV0 522 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 CYP3A7-CYP3A51PA0A087WV96 503 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 ARHGEF35A5YM69 484 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 BTNL10A8MVZ5 291 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 HMGB1P1B2RPK0 211 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 E9PMD0 336 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 MYO1CO00159 1063 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PDXKO00764 312 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 NDUFAB1O14561 156 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 ZEB2O60315 1214 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 GAS7O60861 476 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 HIP1RO75146 1068 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 EYA4O95677 639 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 FTCDO95954 541 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 NR3C1P04150 777 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PLEKP08567 350 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 POLR2MP0CAP2 368 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 SNHG28P0DPA3 235 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 EEF2P13639 858 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 CYP11B2P19099 503 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 CYP3A7P24462 503 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 RPA1P27694 616 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 NOVP48745 357 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 MAN2A2P49641 1150 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 GUCY2FP51841 1108 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PABPC4Q13310 644 aaKnown RBP eCLIP4.49□□□□□ -1.69
RBM39-229ENST00000475651 RRP1BQ14684 758 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 STILQ15468 1287 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 USH1GQ495M9 461 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 Q4G0T1 1027 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 HYIQ5T013 277 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 KLHDC7AQ5VTJ3 777 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 CDC42EP5Q6NZY7 148 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 ALKBH5Q6P6C2 394 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 LRRC55Q6ZSA7 311 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 SMIM5Q71RC9 77 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 DAAM2Q86T65 1068 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 SRLQ86TD4 932 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 HOOK3Q86VS8 718 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 TPH2Q8IWU9 490 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 FAM186BQ8IYM0 893 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 SYT2Q8N9I0 419 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 EIF1ADQ8N9N8 165 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 SUPT20HQ8NEM7 779 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 BCAS4Q8TDM0 211 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 AENQ8WTP8 325 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 HAS1Q92839 578 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PTPRN2Q92932 1015 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 GCDHQ92947 438 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 ZNF622Q969S3 477 aaKnown RBP eCLIP4.49□□□□□ -1.693e-14■■□□□ 13.7
RBM39-229ENST00000475651 MASTLQ96GX5 879 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 GDAP1L1Q96MZ0 367 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 RUNDC3BQ96NL0 473 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 IWS1Q96ST2 819 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 POLR3CQ9BUI4 534 aaPredicted RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 TRIM55Q9BYV6 548 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 WDR11Q9BZH6 1224 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 ZNF408Q9H9D4 720 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PARVGQ9HBI0 331 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 PLCB1Q9NQ66 1216 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 SLC2A4RGQ9NR83 387 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 FAM114A2Q9NRY5 505 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 KCND2Q9NZV8 630 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 GCNT4Q9P109 453 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 BCCIPQ9P287 314 aaKnown RBP eCLIP4.49□□□□□ -1.69
RBM39-229ENST00000475651 SEL1LQ9UBV2 794 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 MTRF1LQ9UGC7 380 aaKnown RBP4.49□□□□□ -1.69
RBM39-229ENST00000475651 POLLQ9UGP5 575 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 MTUS1Q9ULD2 1270 aa4.49□□□□□ -1.69
RBM39-229ENST00000475651 MRPL11Q9Y3B7 192 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms