RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RPL6Q02878 288 aaKnown RBP16.53■□□□□ 0.24
SRRT-209ENST00000474896 DUOXA1Q1HG43 343 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 KIAA1211LQ6NV74 962 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 SLC36A4Q6YBV0 504 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 SCARA5Q6ZMJ2 495 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 MIB1Q86YT6 1006 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 C12orf56Q8IXR9 622 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 TERB1Q8NA31 727 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 CEP76Q8TAP6 659 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 SMARCD1Q96GM5 515 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 SMOQ99835 787 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 TMEM121BQ9BXQ6 578 aaPredicted RBP16.53■□□□□ 0.24
SRRT-209ENST00000474896 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 SLC6A14Q9UN76 642 aa16.53■□□□□ 0.24
SRRT-209ENST00000474896 TNRC6BQ9UPQ9 1833 aaKnown RBP16.53■□□□□ 0.24
SRRT-209ENST00000474896 FAM92AA1XBS5 289 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 BEST1O76090 585 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 TBX18O95935 607 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 HOXB2P14652 356 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 NTSR1P30989 418 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 AFMP43652 599 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 AP3M2P53677 418 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 ATXN3P54252 364 aaPredicted RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 GFPT1Q06210 699 aaPredicted RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 NCOA4Q13772 614 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 HTR3DQ70Z44 454 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 ZMIZ2Q8NF64 920 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 PARD3BQ8TEW8 1205 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 GATA6Q92908 595 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 DUSP9Q99956 384 aaKnown RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 GTPBP2Q9BX10 602 aaKnown RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 KLF16Q9BXK1 252 aaPredicted RBP16.52■□□□□ 0.24
SRRT-209ENST00000474896 KRT82Q9NSB4 513 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 CALCOCO1Q9P1Z2 691 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.24
SRRT-209ENST00000474896 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.23
SRRT-209ENST00000474896 PLXND1Q9Y4D7 1925 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 SPAARA0A1B0GVQ0 90 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 A0A1W2PQF6 199 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
SRRT-209ENST00000474896 HYAL3O43820 417 aaPredicted RBP16.51■□□□□ 0.23
SRRT-209ENST00000474896 TLR5O60602 858 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 VNN1O95497 513 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 SERPINF2P08697 491 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 CCDC130P13994 396 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 HOXD12P35452 270 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 MAP3K7CLP57077 242 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 CLDN10P78369 228 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 ZNF33AQ06730 810 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 SEMA3BQ13214 749 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 ORC1Q13415 861 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 CUL4BQ13620 913 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 GRAMD4Q6IC98 578 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 TPGS1Q6ZTW0 290 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 PIP4P1Q86T03 277 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 CRYBG2Q8N1P7 616 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 HDDC3Q8N4P3 179 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 SLC2A14Q8TDB8 520 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 ACOX2Q99424 681 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 FBXO44Q9H4M3 255 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 TLR8Q9NR97 1041 aaKnown RBP16.51■□□□□ 0.23
SRRT-209ENST00000474896 DNAJC17Q9NVM6 304 aaKnown RBP16.51■□□□□ 0.23
SRRT-209ENST00000474896 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 MYH10P35580 1976 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 CACNA1EQ15878 2313 aa16.51■□□□□ 0.23
SRRT-209ENST00000474896 IGHV1OR15-9A0A0B4J2B8 117 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 TMEM8BA6NDV4 472 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 UPK3BL1B0FP48 263 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 UPK3BL2E5RIL1 263 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 NEDD8-MDP1E9PL57 170 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 GREM1O60565 184 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 ATP5C1P36542 298 aaKnown RBP16.5■□□□□ 0.23
SRRT-209ENST00000474896 NDST1P52848 882 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
SRRT-209ENST00000474896 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 CHPFQ8IZ52 775 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
SRRT-209ENST00000474896 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 CSNK1G1Q9HCP0 422 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 CYP8B1Q9UNU6 501 aa16.5■□□□□ 0.23
SRRT-209ENST00000474896 PRRT4C9JH25 899 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 OPHN1O60890 802 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 ZNF217O75362 1048 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 P4HA1P13674 534 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 TYRP14679 529 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 DLG4P78352 724 aa16.49■□□□□ 0.23
SRRT-209ENST00000474896 CLEC17AQ6ZS10 378 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms