RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 NXPE3Q969Y0 559 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 PLA2G2FQ9BZM2 168 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 NACA2Q9H009 215 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 KIF9Q9HAQ2 790 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 OBP2AQ9NY56 170 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 NUDT5Q9UKK9 219 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 ARHGAP26Q9UNA1 814 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 CPQQ9Y646 472 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 HEPACAM2A8MVW5 462 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 DPYSL4O14531 572 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 MDM4O15151 490 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 ADCY5O95622 1261 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 TBX18O95935 607 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 LTFP02788 710 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 MBL2P11226 248 aaPredicted RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 MMP8P22894 467 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 NSFP46459 744 aaKnown RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 GABRB2P47870 512 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 ADKP55263 362 aaKnown RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 USP4Q13107 963 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 BTBD8Q5XKL5 378 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 KLHDC10Q6PID8 442 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 OLFML1Q6UWY5 402 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 VITQ6UXI7 678 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 MMS22LQ6ZRQ5 1243 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 TADA2BQ86TJ2 420 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 OR8K1Q8NGG5 319 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 SLC30A5Q8TAD4 765 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 RIN3Q8TB24 985 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 EDEM1Q92611 657 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 E2F7Q96AV8 911 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 ZFRQ96KR1 1074 aaKnown RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 LRRC3BQ96PB8 259 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 CDK5RAP1Q96SZ6 601 aaKnown RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 ABCC13Q9NSE7 274 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 SMPD4Q9NXE4 827 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 MUTYHQ9UIF7 546 aa16.5■□□□□ 0.23
COL1A1-204ENST00000474644 BZW2Q9Y6E2 419 aaKnown RBP16.5■□□□□ 0.23
COL1A1-204ENST00000474644 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-204ENST00000474644 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL1A1-204ENST00000474644 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-204ENST00000474644 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 CDC25BP30305 580 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ATP5C1P36542 298 aaKnown RBP16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ZXDBP98169 803 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 TDGQ13569 410 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 GRM2Q14416 872 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 TAF5Q15542 800 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ZNF77Q15935 545 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
COL1A1-204ENST00000474644 XYLT1Q86Y38 959 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ZDHHC17Q8IUH5 632 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 SLC44A3Q8N4M1 653 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 SH3RF2Q8TEC5 729 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 DEPDC1BQ8WUY9 529 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 FAM149B1Q96BN6 582 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 C11orf70Q9BRQ4 267 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 SMOC2Q9H3U7 446 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ASNSD1Q9NWL6 643 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 ARHGAP20Q9P2F6 1191 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 DNMT3LQ9UJW3 386 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
COL1A1-204ENST00000474644 LEFTY2O00292 366 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 NARSO43776 548 aaKnown RBP16.48■□□□□ 0.23
COL1A1-204ENST00000474644 FYNP06241 537 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 TCF3P15923 654 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 PSMC3P17980 439 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 FCHO2Q0JRZ9 810 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 EFEMP1Q12805 493 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 MON1BQ7L1V2 547 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 SLC26A9Q7LBE3 791 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 PHF13Q86YI8 300 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-204ENST00000474644 MIB1Q86YT6 1006 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 MFSD6LQ8IWD5 586 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 TTC16Q8NEE8 873 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 BPIFB1Q8TDL5 484 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 RNF139Q8WU17 664 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 OLA1Q9NTK5 396 aaKnown RBP16.48■□□□□ 0.23
COL1A1-204ENST00000474644 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
COL1A1-204ENST00000474644 HELZP42694 1942 aaKnown RBP16.47■□□□□ 0.23
COL1A1-204ENST00000474644 HSF2BPO75031 334 aa16.47■□□□□ 0.23
COL1A1-204ENST00000474644 DAB1O75553 588 aa16.47■□□□□ 0.23
COL1A1-204ENST00000474644 CALB1P05937 261 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms