RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MIB1Q86YT6 1006 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 KCTD13Q8WZ19 329 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 GOLGA1Q92805 767 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 PCMTD1Q96MG8 357 aaPredicted RBP14.93□□□□□ -0.02
VAMP4-203ENST00000474047 LSM14BQ9BX40 385 aaKnown RBP14.93□□□□□ -0.02
VAMP4-203ENST00000474047 ST7Q9NRC1 585 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 RASAL2Q9UJF2 1139 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 STRIP2Q9ULQ0 834 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 COL4A2P08572 1712 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 SHISA7A6NL88 538 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PIK3R2O00459 728 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 NHLH1Q02575 133 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 EFEMP1Q12805 493 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ANO6Q4KMQ2 910 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PM20D1Q6GTS8 502 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 KLHDC10Q6PID8 442 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ADGRG2Q8IZP9 1017 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 AOPEPQ8N6M6 819 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 SLC35F5Q8WV83 523 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ZNF606Q8WXB4 792 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 SHC3Q92529 594 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 NDRG1Q92597 394 aaKnown RBP14.92□□□□□ -0.02
VAMP4-203ENST00000474047 P2RY13Q9BPV8 354 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ZSWIM1Q9BR11 485 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 KLF16Q9BXK1 252 aaPredicted RBP14.92□□□□□ -0.02
VAMP4-203ENST00000474047 SIX2Q9NPC8 291 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 CNGB3Q9NQW8 809 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 SMTNL1A8MU46 457 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 MDM4O15151 490 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ADH1CP00326 375 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 CHRNB1P11230 501 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 COG7P83436 770 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PPP2R5DQ14738 602 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PKDCCQ504Y2 493 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PMF1Q6P1K2 205 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ZNF276Q8N554 614 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 CD101Q93033 1021 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 OTUB2Q96DC9 234 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 ZFRQ96KR1 1074 aaKnown RBP14.92□□□□□ -0.02
VAMP4-203ENST00000474047 HSFY1Q96LI6 401 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 PDCL3Q9H2J4 239 aa14.92□□□□□ -0.02
VAMP4-203ENST00000474047 OLA1Q9NTK5 396 aaKnown RBP14.92□□□□□ -0.02
VAMP4-203ENST00000474047 RBM12Q9NTZ6 932 aaKnown RBP14.92□□□□□ -0.02
VAMP4-203ENST00000474047 FOXN3O00409 490 aaPredicted RBP14.91□□□□□ -0.02
VAMP4-203ENST00000474047 TRDMT1O14717 391 aaKnown RBP14.91□□□□□ -0.02
VAMP4-203ENST00000474047 HMBSP08397 361 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 KRT9P35527 623 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 GALK1P51570 392 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 BPIFB4P59827 614 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 KCNMA1Q12791 1236 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 MTAPQ13126 283 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 FZD5Q13467 585 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 DHCR24Q15392 516 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 KLHL40Q2TBA0 621 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 KLHDC7AQ5VTJ3 777 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 IER2Q9BTL4 223 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 MIS12Q9H081 205 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 CHRDQ9H2X0 955 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 ACP6Q9NPH0 428 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 FAM86C1Q9NVL1 165 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 MARCH2Q9P0N8 246 aa14.91□□□□□ -0.02
VAMP4-203ENST00000474047 MUC6Q6W4X9 2439 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 BECN2A8MW95 431 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 FBXO21O94952 628 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 CYP17A1P05093 508 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 DRD1P21728 446 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 ACADSBP45954 432 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
VAMP4-203ENST00000474047 CSTF1Q05048 431 aaKnown RBP14.9□□□□□ -0.02
VAMP4-203ENST00000474047 DRAP1Q14919 205 aaPredicted RBP14.9□□□□□ -0.02
VAMP4-203ENST00000474047 ANO4Q32M45 955 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 BSPRYQ5W0U4 402 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 HTR3DQ70Z44 454 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 BBS7Q8IWZ6 715 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 SYNPOQ8N3V7 929 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 EDEM1Q92611 657 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 ABCC13Q9NSE7 274 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 CEP83Q9Y592 693 aa14.9□□□□□ -0.02
VAMP4-203ENST00000474047 SLC12A8A0AV02 714 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 E7ENQ6 273 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 ADH5P11766 374 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 GPD2P43304 727 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 DAOAP59103 153 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 UBXN1Q04323 297 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 GAD2Q05329 585 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 TMEM196Q5HYL7 178 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 LY6G5CQ5SRR4 150 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 SMYD5Q6GMV2 418 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 ZNF687Q8N1G0 1237 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 SCML4Q8N228 414 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 IRGQQ8WZA9 623 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 CHFRQ96EP1 664 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 DCLK3Q9C098 648 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 LIMA1Q9UHB6 759 aaKnown RBP14.89□□□□□ -0.03
VAMP4-203ENST00000474047 AJAP1Q9UKB5 411 aaPredicted RBP14.89□□□□□ -0.03
VAMP4-203ENST00000474047 ZNF510Q9Y2H8 683 aa14.89□□□□□ -0.03
VAMP4-203ENST00000474047 FHOD1Q9Y613 1164 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms