RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NELL2Q99435 816 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 MIS12Q9H081 205 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 LHX5Q9H2C1 402 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 ABCC13Q9NSE7 274 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 TBC1D14Q9P2M4 693 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 RASAL2Q9UJF2 1139 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 PCDHGC3Q9UN70 934 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 PIAS3Q9Y6X2 628 aa14.43□□□□□ -0.1
USF1-205ENST00000473969 A0A1B0GTH6 734 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 E2F8A0AVK6 867 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 TEX33O43247 280 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 NFATC1O95644 943 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 TBX18O95935 607 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 PDGFBP01127 241 aaPredicted RBP14.42□□□□□ -0.1
USF1-205ENST00000473969 IRF1P10914 325 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 CLCN5P51795 746 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 MLLT6P55198 1093 aaPredicted RBP14.42□□□□□ -0.1
USF1-205ENST00000473969 STARD6P59095 220 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 DAOAP59103 153 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 COG7P83436 770 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 EFEMP1Q12805 493 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 RUNX3Q13761 415 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 UBXN2BQ14CS0 331 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 BSPRYQ5W0U4 402 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
USF1-205ENST00000473969 ZNF677Q86XU0 584 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 MIB1Q86YT6 1006 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 TMEM35BQ8NCS4 154 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 MSANTD4Q8NCY6 345 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 IPO4Q8TEX9 1081 aaKnown RBP14.42□□□□□ -0.1
USF1-205ENST00000473969 FAM83CQ9BQN1 747 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 EBF3Q9H4W6 596 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 OSER1Q9NX31 292 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 GTSE1Q9NYZ3 720 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 NUDT5Q9UKK9 219 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 SIT1Q9Y3P8 196 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 WNT6Q9Y6F9 365 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 GREB1Q4ZG55 1949 aa14.42□□□□□ -0.1
USF1-205ENST00000473969 A0A1W2PQC6 194 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 CAPN9O14815 690 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 PGFP49763 221 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 TNK2Q07912 1038 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 TRIM68Q6AZZ1 485 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 RALGPS2Q86X27 583 aaPredicted RBP14.41□□□□□ -0.1
USF1-205ENST00000473969 SCUBE3Q8IX30 993 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 FAM3CQ92520 227 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 NDRG1Q92597 394 aaKnown RBP14.41□□□□□ -0.1
USF1-205ENST00000473969 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 PPP1R13BQ96KQ4 1090 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
USF1-205ENST00000473969 SLC4A5Q9BY07 1137 aa14.41□□□□□ -0.1
USF1-205ENST00000473969 NUP210Q8TEM1 1887 aaPredicted RBP14.41□□□□□ -0.1
USF1-205ENST00000473969 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 YJEFN3A6XGL0 299 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 E5RJQ4 531 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 E7ENQ6 273 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 ARNTLO00327 626 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 MDM4O15151 490 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 EPHB6O15197 1021 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 LTFP02788 710 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 COL9A1P20849 921 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 CD72P21854 359 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 AVPR2P30518 371 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 JAM2P57087 298 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 ARID5AQ03989 594 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 PDCLQ13371 301 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 NR1I3Q14994 352 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 IER5LQ5T953 404 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 TMEM110Q86TL2 294 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 C1orf131Q8NDD1 294 aaKnown RBP14.4□□□□□ -0.1
USF1-205ENST00000473969 EDEM1Q92611 657 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 OTUB2Q96DC9 234 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 KLF16Q9BXK1 252 aaPredicted RBP14.4□□□□□ -0.1
USF1-205ENST00000473969 DCLK3Q9C098 648 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 ECT2Q9H8V3 914 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 MARCH2Q9P0N8 246 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 NDRG2Q9UN36 371 aaKnown RBP14.4□□□□□ -0.1
USF1-205ENST00000473969 ZNF510Q9Y2H8 683 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 HCN4Q9Y3Q4 1203 aa14.4□□□□□ -0.1
USF1-205ENST00000473969 TECTAO75443 2155 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 SLC12A8A0AV02 714 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 SPECC1L-ADORA2AF8WAN1 911 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 CBFA2T2O43439 604 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 LSM8O95777 96 aaKnown RBP14.39□□□□□ -0.11
USF1-205ENST00000473969 ADH1CP00326 375 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 HMBSP08397 361 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 NCAM1P13591 858 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 ARSAP15289 507 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 FERP16591 822 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 AOC1P19801 751 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 RPL34P49207 117 aaKnown RBP14.39□□□□□ -0.11
USF1-205ENST00000473969 ZXDBP98169 803 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 EML3Q32P44 896 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 EFHC1Q5JVL4 640 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 OR6B2Q6IFH4 312 aa14.39□□□□□ -0.11
USF1-205ENST00000473969 HTR3DQ70Z44 454 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms