RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 DIS3LQ8TF46 1054 aaKnown RBP18.78■□□□□ 0.6
VARS2-206ENST00000473916 B3GALT6Q96L58 329 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 RUFY1Q96T51 708 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 LAMA2P24043 3122 aaKnown RBP18.78■□□□□ 0.6
VARS2-206ENST00000473916 PITPNM1O00562 1244 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 MAP3K6O95382 1288 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 PBX3P40426 434 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 DAOAP59103 153 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 BOLA3Q53S33 107 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 C1orf228Q6PIY5 440 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 PQLC3Q8N755 202 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 LRRN4Q8WUT4 740 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 TEKT4Q8WW24 435 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 CASD1Q96PB1 797 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 SEMA4AQ9H3S1 761 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
VARS2-206ENST00000473916 DSEQ9UL01 958 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 PCDHB8Q9UN66 801 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
VARS2-206ENST00000473916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.77■□□□□ 0.6
VARS2-206ENST00000473916 SGK1O00141 431 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 MDM4O15151 490 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 IFNB1P01574 187 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 CYP2C18P33260 490 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 PMS2P54278 862 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 YWHAHQ04917 246 aaPredicted RBP18.77■□□□□ 0.6
VARS2-206ENST00000473916 P3H1Q32P28 736 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 SLC25A52Q3SY17 297 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 TRIM60Q495X7 471 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 ERMARDQ5T6L9 678 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 IZUMO3Q5VZ72 239 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 STKLD1Q8NE28 680 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 PCDH19Q8TAB3 1148 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 RNF157Q96PX1 679 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 SLC2A13Q96QE2 648 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 HIPK3Q9H422 1215 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 DHX35Q9H5Z1 703 aaKnown RBP18.77■□□□□ 0.6
VARS2-206ENST00000473916 NRDE2Q9H7Z3 1164 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 CSNK1G1Q9HCP0 422 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 MTMR10Q9NXD2 777 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 AP4E1Q9UPM8 1137 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 PCDHB7Q9Y5E2 793 aa18.77■□□□□ 0.6
VARS2-206ENST00000473916 MYO16Q9Y6X6 1858 aa18.77■□□□□ 0.59
VARS2-206ENST00000473916 APOC4-APOC2K7ER74 178 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 APOC2P02655 101 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ITGAVP06756 1048 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 L1CAMP32004 1257 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ANKRD20A8PQ5CZ79 823 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 DEFB128Q7Z7B8 93 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 UNC45BQ8IWX7 931 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 PLD5Q8N7P1 536 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 SEPT8Q92599 483 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 FAM193BQ96PV7 902 aaPredicted RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 KCTD15Q96SI1 283 aaPredicted RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 NPY6RQ99463 290 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 MTRF1LQ9UGC7 380 aaKnown RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 DRG1Q9Y295 367 aaKnown RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 AMHP03971 560 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 SHBGP04278 402 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ITIH2P19823 946 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 TYMPP19971 482 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 GBP1P32455 592 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ZNF844Q08AG5 666 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 NME3Q13232 169 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 CEP85LQ5SZL2 805 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 SLC39A5Q6ZMH5 540 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 TAB3Q8N5C8 712 aaPredicted RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 CCDC89Q8N998 374 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 UHMK1Q8TAS1 419 aaKnown RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 SPATA18Q8TC71 538 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 EDEM1Q92611 657 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 NT5C3BQ969T7 300 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 MAK16Q9BXY0 300 aaKnown RBP18.76■□□□□ 0.59
VARS2-206ENST00000473916 FAM204AQ9H8W3 233 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 PIGVQ9NUD9 493 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 ANAPC5Q9UJX4 755 aa18.76■□□□□ 0.59
VARS2-206ENST00000473916 M0QYT0 321 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 CYP2F1P24903 491 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 EIF3EP60228 445 aaKnown RBP18.75■□□□□ 0.59
VARS2-206ENST00000473916 TLE2Q04725 743 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 GPS1Q13098 491 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 PDK2Q15119 407 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 SLC39A12Q504Y0 691 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 KCTD16Q68DU8 428 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 STRADAQ7RTN6 431 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 ABI1Q8IZP0 508 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 THEM5Q8N1Q8 247 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 SH2D3CQ8N5H7 860 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 CCDC33Q8N5R6 958 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 POPDC2Q9HBU9 364 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 MFHAS1Q9Y4C4 1052 aa18.75■□□□□ 0.59
VARS2-206ENST00000473916 NT5C1B-RDH14C9J2C7 533 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 ZBED1O96006 694 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 DESP17661 470 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 NOS2P35228 1153 aa18.74■□□□□ 0.59
VARS2-206ENST00000473916 TSPY1Q01534 308 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms