RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SF3A3Q12874 501 aaKnown RBP eCLIP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PPP2R5BQ15173 497 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF827Q17R98 1081 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TM4SF20Q53R12 229 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TCP11X2Q5H9J9 407 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC30A10Q6XR72 485 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CYB5R4Q7L1T6 521 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 ADAT2Q7Z6V5 191 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CDH24Q86UP0 819 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 FBXL16Q8N461 479 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 BEND7Q8N7W2 519 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MB21D1Q8N884 522 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PCYOX1LQ8NBM8 494 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 BVESQ8NE79 360 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 EXD1Q8NHP7 514 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 ZFP28Q8NHY6 868 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 RNF141Q8WVD5 230 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 WFDC12Q8WWY7 111 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 RMDN1Q96DB5 314 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MRGPRX3Q96LB0 322 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TMEM60Q9H2L4 133 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PABPC3Q9H361 631 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NCOA5Q9HCD5 579 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MOV10Q9HCE1 1003 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 GP6Q9HCN6 339 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 RRN3Q9NYV6 651 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 EHD2Q9NZN4 543 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PADI4Q9UM07 663 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PCDHA13Q9Y5I0 950 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 ARPC4-TTLL3A0A0A6YYG9 625 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 IQANK1A0A1B0GTG1 560 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 A0A1W2PQJ5 194 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FADS2P1A8MWK0 482 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 KCNJ18B7U540 433 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 C9orf172C9J069 976 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 H0YC42 278 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC22A1O15245 554 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 DYNC1LI2O43237 492 aaPredicted RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TBX1O43435 398 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF254O75437 659 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 GAS8O95995 478 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FUCA1P04066 466 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TFAP2AP05549 437 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 T-ENOLP0DO92 83 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FDPSP14324 419 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TCEA1P23193 301 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 LONP1P36776 959 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TPD52P55327 224 aaPredicted RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ATP6V0D1P61421 351 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 AP2B1P63010 937 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 NRG1Q02297 640 aaPredicted RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 CDK18Q07002 472 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 KCNJ12Q14500 433 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT81Q14533 505 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TNIP1Q15025 636 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 SF3B3Q15393 1217 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TRADDQ15628 312 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF829Q3KNS6 432 aaPredicted RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 NADK2Q4G0N4 442 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ANKRD20A4Q4UJ75 823 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FIGNQ5HY92 759 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 KLHDC7AQ5VTJ3 777 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 BRINP3Q76B58 766 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 PODNQ7Z5L7 613 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 CENPSQ8N2Z9 138 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 CSGALNACT2Q8N6G5 542 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 BBOF1Q8ND07 529 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 OR6Y1Q8NGX8 325 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 BRSK1Q8TDC3 778 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ANKRD49Q8WVL7 239 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 RCC1LQ96I51 464 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 MAGEB18Q96M61 343 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 BTBD9Q96Q07 612 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 SPZ1Q9BXG8 430 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ASPNQ9BXN1 380 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 LGR6Q9HBX8 967 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 DCAF16Q9NXF7 216 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 HACD3Q9P035 362 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 RWDD2AQ9UIY3 292 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 GNPTGQ9UJJ9 305 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FOXN1O15353 648 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 PPM1BO75688 479 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 UFL1O94874 794 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 KLHL2O95198 593 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 FGFR1P11362 822 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 ANPEPP15144 967 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 HNRNPH3P31942 346 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 CHKAP35790 457 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 CLK1P49759 484 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 NR1H2P55055 460 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 VCPP55072 806 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 PDK3Q15120 406 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 TMEM266Q2M3C6 531 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 RGS21Q2M5E4 152 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 DCLRE1AQ6PJP8 1040 aa5.34□□□□□ -1.55
TMEM39A-206ENST00000473684 UGT2A3Q6UWM9 527 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms