RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZNF302Q9NR11 478 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 FBXO6Q9NRD1 293 aaPredicted RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 FBXO28Q9NVF7 368 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 C6orf203Q9P0P8 240 aaPredicted RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 CIDEBQ9UHD4 219 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CNTNAP2Q9UHC6 1331 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ARHGAP10A1A4S6 786 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 APOL1O14791 398 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SNNO75324 88 aaPredicted RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 TMEM63AO94886 807 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 TRUB2O95900 331 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 PABPC4LP0CB38 370 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 MLNP12872 115 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 ATICP31939 592 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ARL2P36404 184 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 PRKAA2P54646 552 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 AQP5P55064 265 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ACTR2P61160 394 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CFAP157Q5JU67 520 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 RNF220Q5VTB9 566 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ANKRD22Q5VYY1 191 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 METTL21CQ5VZV1 264 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 DEPDC1BQ8WUY9 529 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 STON2Q8WXE9 905 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SERAC1Q96JX3 654 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 MPHOSPH6Q99547 160 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 ADPGKQ9BRR6 497 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CCDC106Q9BWC9 280 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 NIFKQ9BYG3 293 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 RAVER2Q9HCJ3 691 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 KRT82Q9NSB4 513 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 RNF146Q9NTX7 359 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 USP18Q9UMW8 372 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 PLA2G4CQ9UP65 541 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CDY2AQ9Y6F7 541 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CDY1Q9Y6F8 540 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SIP14410 1827 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ADGRA2Q96PE1 1338 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 FAM237BA0A1B0GVD1 139 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 EME2A4GXA9 379 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 ATP9BO43861 1147 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ADCY3O60266 1144 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 HMGCRP04035 888 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 SERPINE1P05121 402 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 KCNA2P16389 499 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 GPD1P21695 349 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 FDFT1P37268 417 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 MXD4Q14582 209 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 EFTUD2Q15029 972 aaKnown RBP eCLIP6.34□□□□□ -1.392e-6■□□□□ 10.5
HERC4-209ENST00000473533 C2CD6Q53TS8 623 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 LMBRD2Q68DH5 695 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 ABHD15Q6UXT9 468 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 SH2D5Q6ZV89 423 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TAS1R3Q7RTX0 852 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 DRAXINQ8NBI3 349 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 UCMAQ8WVF2 138 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 WDR60Q8WVS4 1066 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 NRG4Q8WWG1 115 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PPP1R14BQ96C90 147 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 RAB6BQ9NRW1 208 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TXNDC16Q9P2K2 825 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ATXN10Q9UBB4 475 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PRPF19Q9UMS4 504 aaKnown RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 ARHGAP26Q9UNA1 814 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 KPNA7A9QM74 516 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 AP1G1O43747 822 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 STBD1O95210 358 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 FGFR1P11362 822 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ADSLP30566 484 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 NR2C2P49116 596 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ZNF143P52747 638 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 CDH6P55285 790 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 BCAR1P56945 870 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 KDSRQ06136 332 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 CDC16Q13042 620 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 CCDC153Q494R4 210 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 MSS51Q4VC12 460 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 RARS2Q5T160 578 aaKnown RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 IER5Q5VY09 327 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 LLGL2Q6P1M3 1020 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 C16orf89Q6UX73 402 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PDSS2Q86YH6 399 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 UNC45BQ8IWX7 931 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 NDUFAF2Q8N183 169 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ACTRT2Q8TDY3 377 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 MCRS1Q96EZ8 462 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 KLF6Q99612 283 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 TTC1Q99614 292 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 SDCBP2Q9H190 292 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ADAM28Q9UKQ2 775 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TTLL3Q9Y4R7 772 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 MAD1L1Q9Y6D9 718 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PSME4Q14997 1843 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms