RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 CDK7P50613 346 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 EIF4A1P60842 406 aaKnown RBP7.16□□□□□ -1.26
SEC22A-204ENST00000473494 TUBA3CQ13748 450 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 TBCCQ15814 346 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 CCDC70Q6NSX1 233 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 MSANTD2Q6P1R3 559 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 TUBA3EQ6PEY2 450 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 MMS22LQ6ZRQ5 1243 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 MRGPREQ86SM8 312 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 RAB11FIP4Q86YS3 637 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
SEC22A-204ENST00000473494 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.16□□□□□ -1.26
SEC22A-204ENST00000473494 TOR1AIP2Q8NFQ8 470 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 USP13Q92995 863 aaPredicted RBP7.16□□□□□ -1.26
SEC22A-204ENST00000473494 RFKQ969G6 155 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 RILPL2Q969X0 211 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 SDCCAG3Q96C92 435 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 R3HDM4Q96D70 268 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 PYM1Q9BRP8 204 aaKnown RBP7.16□□□□□ -1.26
SEC22A-204ENST00000473494 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 TWSG1Q9GZX9 223 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 SERHL2Q9H4I8 314 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 RXFP3Q9NSD7 469 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 ANKFY1Q9P2R3 1169 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 ANAPC4Q9UJX5 808 aa7.16□□□□□ -1.26
SEC22A-204ENST00000473494 HMX3A6NHT5 357 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 B9A039 149 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 H0Y3Z8 333 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 MPPED1O15442 326 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TJP3O95049 919 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TK1P04183 234 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 CYP1B1Q16678 543 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TMEM196Q5HYL7 178 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 LY6G5CQ5SRR4 150 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TREML2Q5T2D2 321 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 FAM90A2PQ658T7 463 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 PIK3AP1Q6ZUJ8 805 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TRABD2AQ86V40 505 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 LRRTM4Q86VH4 590 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 HERC6Q8IVU3 1022 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 FTSJ3Q8IY81 847 aaKnown RBP7.15□□□□□ -1.26
SEC22A-204ENST00000473494 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 PROKR1Q8TCW9 393 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 RUBCNQ92622 972 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 Q96MF0 132 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 AIFM2Q9BRQ8 373 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 TTPALQ9BTX7 342 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 KCNK9Q9NPC2 374 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 RASSF1Q9NS23 344 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 CNTN6Q9UQ52 1028 aa7.15□□□□□ -1.26
SEC22A-204ENST00000473494 A0A1B0GVC2 190 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 TMEM225BP0DP42 221 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 CD53P19397 219 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 GKP32189 559 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 PBX1P40424 430 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 FOLR3P41439 243 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 TPTEP56180 551 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 AASDHQ4L235 1098 aaPredicted RBP7.14□□□□□ -1.27
SEC22A-204ENST00000473494 SIMC1Q8NDZ2 872 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 OR6Y1Q8NGX8 325 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 CTHRC1Q96CG8 243 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 WDR11Q9BZH6 1224 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 VPS16Q9H269 839 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 SEPSECSQ9HD40 501 aaKnown RBP7.14□□□□□ -1.27
SEC22A-204ENST00000473494 G6PC2Q9NQR9 355 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 DKK3Q9UBP4 350 aa7.14□□□□□ -1.27
SEC22A-204ENST00000473494 NKX1-2Q9UD57 310 aaPredicted RBP7.14□□□□□ -1.27
SEC22A-204ENST00000473494 MAST3O60307 1309 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 RRN3P2A6NIE6 340 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PSMD9O00233 223 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 CTIFO43310 598 aaKnown RBP7.13□□□□□ -1.27
SEC22A-204ENST00000473494 SPRY2O43597 315 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PEX1O43933 1283 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PPP6R2O75170 966 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PRKCBP05771 671 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 CHRM2P08172 466 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 TGM1P22735 817 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 MCM2P49736 904 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PAPOLAP51003 745 aaKnown RBP7.13□□□□□ -1.27
SEC22A-204ENST00000473494 DGKQP52824 942 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 DGCR2P98153 550 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 FOXE3Q13461 319 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 BMPR2Q13873 1038 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 KCNJ12Q14500 433 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 TAF12Q16514 161 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 FNDC7Q5VTL7 733 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 DPY19L3Q6ZPD9 716 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 RINLQ6ZS11 566 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 USP51Q70EK9 711 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 C2CD5Q86YS7 1000 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PAF1Q8N7H5 531 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 OVCA2Q8WZ82 227 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 HERVK_113Q902F9 699 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 FBXL20Q96IG2 436 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 PRR25Q96S07 402 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 ELAC1Q9H777 363 aaKnown RBP7.13□□□□□ -1.27
SEC22A-204ENST00000473494 SLC2A4RGQ9NR83 387 aa7.13□□□□□ -1.27
SEC22A-204ENST00000473494 EFCAB8A8MWE9 144 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 CER1O95813 267 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 AGR2O95994 175 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms