RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 SESTD1Q86VW0 696 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 GSTCDQ8NEC7 633 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 C20orf27Q9GZN8 174 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 ASNSD1Q9NWL6 643 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 SOX13Q9UN79 622 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 TOM1L1O75674 476 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 BPGMP07738 259 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 C6orf222P0C671 652 aaPredicted RBP14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 DYNC1I2Q13409 638 aaKnown RBP14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 MROH9Q5TGP6 573 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 KYAT3Q6YP21 454 aaKnown RBP14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 ZNF526Q8TF50 670 aaPredicted RBP14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 KCNN1Q92952 543 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 PEBP4Q96S96 227 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 GORASP1Q9BQQ3 440 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 FRMD8Q9BZ67 464 aaPredicted RBP14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 ZCWPW1Q9H0M4 648 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 ADCY3O60266 1144 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 APOEP02649 317 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 APRTP07741 180 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 CSH1P0DML2 217 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 CSH2P0DML3 217 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 PRKCHP24723 683 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 WASHC5Q12768 1159 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 GRM1Q13255 1194 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 RAPH1Q70E73 1250 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 ADPGKQ9BRR6 497 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 CENPKQ9BS16 269 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 APOL6Q9BWW8 343 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 C1orf21Q9H246 121 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 EBF3Q9H4W6 596 aa14.77□□□□□ -0.04
NHLRC3-204ENST00000473371 SNNO75324 88 aaPredicted RBP14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 ATP5BP06576 529 aaKnown RBP14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 SLC25A3Q00325 362 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 LRRC36Q1X8D7 754 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 CNPY1Q3B7I2 92 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 ZPBP2Q6X784 338 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 RASSF3Q86WH2 238 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 RAB3IL1Q8TBN0 382 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 APBB2Q92870 758 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 KLC2Q9H0B6 622 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 S100A14Q9HCY8 104 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 PGAP2Q9UHJ9 254 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 HEY1Q9Y5J3 304 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 MAD1L1Q9Y6D9 718 aa14.77□□□□□ -0.05
NHLRC3-204ENST00000473371 A0A088AWK7 358 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SPATA31C2B4DYI2 1134 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 ZBED1O96006 694 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 KRT19P08727 400 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 MAP3K10Q02779 954 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 KRT81Q14533 505 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 EFHC1Q5JVL4 640 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 CAND1Q86VP6 1230 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 ST13P4Q8IZP2 240 aaPredicted RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 STKLD1Q8NE28 680 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 RNF217Q8TC41 542 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 PYDC1Q8WXC3 89 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 MRPL4Q9BYD3 311 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 USP29Q9HBJ7 922 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 MKS1Q9NXB0 559 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SDR42E2A6NKP2 422 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 BIRC5O15392 142 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 RNASEH1O60930 286 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 TNNC2P02585 160 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 RBL1P28749 1068 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 CDK7P50613 346 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 CDH8P55286 799 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 PDE1BQ01064 536 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SP2Q02086 613 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SURF1Q15526 300 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SH3PXD2AQ5TCZ1 1133 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 AAGABQ6PD74 315 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 UNC5AQ6ZN44 842 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 EGFL6Q8IUX8 553 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 WDR75Q8IWA0 830 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SHKBP1Q8TBC3 707 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 CCDC28BQ9BUN5 200 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 SDCBP2Q9H190 292 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 XAB2Q9HCS7 855 aaKnown RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 DMAP1Q9NPF5 467 aaPredicted RBP14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 ETNK2Q9NVF9 386 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 THAP1Q9NVV9 213 aa14.76□□□□□ -0.05
NHLRC3-204ENST00000473371 OGTO15294 1046 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 MAP3K6O95382 1288 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 CRHR1P34998 444 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 ASPHQ12797 758 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 ACAP1Q15027 740 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 CDO1Q16878 200 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 LIN52Q52LA3 116 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 POU5F2Q8N7G0 328 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 SLC4A11Q8NBS3 891 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 OR6Y1Q8NGX8 325 aa14.75□□□□□ -0.05
NHLRC3-204ENST00000473371 SPATA16Q9BXB7 569 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms