RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ANP32BQ92688 251 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 SHDQ96IW2 340 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 FAM83CQ9BQN1 747 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 TRMT61BQ9BVS5 477 aaKnown RBP13.79□□□□□ -0.2
TPM3-216ENST00000473036 HPS4Q9NQG7 708 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 GKN1Q9NS71 199 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 OBP2AQ9NY56 170 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 DLL3Q9NYJ7 618 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 SIT1Q9Y3P8 196 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 EPG5Q9HCE0 2579 aa13.79□□□□□ -0.2
TPM3-216ENST00000473036 CEP250Q9BV73 2442 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 NCOR2Q9Y618 2525 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 FAM170AA1A519 330 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 LEFTY2O00292 366 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 GREM1O60565 184 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 TLR5O60602 858 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 RARGP13631 454 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 LCP1P13796 627 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 CYP11B1P15538 503 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 CHRNB2P17787 502 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 MAGEA9P43362 315 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 DAOAP59103 153 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 STILQ15468 1287 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 FILIP1LQ4L180 1135 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 SH3RF2Q8TEC5 729 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 SLC20A1Q8WUM9 679 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 DEPDC1BQ8WUY9 529 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 BAP1Q92560 729 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 PIWIL1Q96J94 861 aaKnown RBP13.78□□□□□ -0.2
TPM3-216ENST00000473036 SLC4A5Q9BY07 1137 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 DNAI2Q9GZS0 605 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 LINC00597Q9H2U6 94 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 TBC1D17Q9HA65 648 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 HEBP1Q9NRV9 189 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 SMPD4Q9NXE4 827 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 ZMYM5Q9UJ78 669 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
TPM3-216ENST00000473036 CPQQ9Y646 472 aa13.78□□□□□ -0.2
TPM3-216ENST00000473036 CHADO15335 359 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 AP5Z1O43299 807 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 GFPT2O94808 682 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 ZBED1O96006 694 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 FYNP06241 537 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 SP9P0CG40 484 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 ARSAP15289 507 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 TCF3P15923 654 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 PFKLP17858 780 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 SOX9P48436 509 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 TUBP50607 506 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 MEA1Q16626 185 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 SLC44A4Q53GD3 710 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 E4F1Q66K89 784 aaPredicted RBP13.77□□□□□ -0.21
TPM3-216ENST00000473036 SMYD5Q6GMV2 418 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 NEK11Q8NG66 645 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 EPS8L1Q8TE68 723 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 E2F7Q96AV8 911 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 P2RY11Q96G91 374 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 CPXM1Q96SM3 734 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 KLF16Q9BXK1 252 aaPredicted RBP13.77□□□□□ -0.21
TPM3-216ENST00000473036 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 TLR8Q9NR97 1041 aaKnown RBP13.77□□□□□ -0.21
TPM3-216ENST00000473036 NAGPAQ9UK23 515 aa13.77□□□□□ -0.21
TPM3-216ENST00000473036 E5RJQ4 531 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 ZNF263O14978 683 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 MMEP08473 750 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 CD72P21854 359 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 SOX5P35711 763 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 STARD6P59095 220 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 YWHAGP61981 247 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM3-216ENST00000473036 PTK2Q05397 1052 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 PDCLQ13371 301 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 MTF1Q14872 753 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 TAF5Q15542 800 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 NAIF1Q69YI7 327 aaPredicted RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 TMEM110Q86TL2 294 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 SCUBE3Q8IX30 993 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 KIAA2013Q8IYS2 634 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 SCML4Q8N228 414 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
TPM3-216ENST00000473036 TTC16Q8NEE8 873 aa13.76□□□□□ -0.21
TPM3-216ENST00000473036 HSFY1Q96LI6 401 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms