RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 HHIPQ96QV1 700 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 PNKPQ96T60 521 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 DNAI2Q9GZS0 605 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 SPHK2Q9NRA0 654 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 CLIC5Q9NZA1 410 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 MDM4O15151 490 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 AXIN1O15169 862 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 KAT7O95251 611 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 IRF1P10914 325 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 KIR2DL1P43626 348 aaPredicted RBP12.13□□□□□ -0.47
COL4A3-205ENST00000471862 PSEN1P49768 467 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 MARSP56192 900 aaKnown RBP12.13□□□□□ -0.47
COL4A3-205ENST00000471862 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
COL4A3-205ENST00000471862 SPEM2Q0P670 501 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 Q6ZNB5 142 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 ERMP1Q7Z2K6 904 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 PIGZQ86VD9 579 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 TMEM25Q86YD3 366 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
COL4A3-205ENST00000471862 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 LMO3Q8TAP4 145 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 NACA2Q9H009 215 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
COL4A3-205ENST00000471862 PLXND1Q9Y4D7 1925 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 TULP2O00295 520 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 BIN1O00499 593 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 P4HA2O15460 535 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 TULP3O75386 442 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 APBB3O95704 486 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 APODP05090 189 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 GRIA2P42262 883 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 SEC13P55735 322 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 CEP68Q76N32 757 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 CACNA2D4Q7Z3S7 1137 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 RASSF3Q86WH2 238 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 ABCA7Q8IZY2 2146 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 IL17RCQ8NAC3 791 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 LOXL4Q96JB6 756 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 ZC3H10Q96K80 434 aaKnown RBP12.12□□□□□ -0.47
COL4A3-205ENST00000471862 ARHGEF4Q9NR80 690 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 MARK1Q9P0L2 795 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 DNMT3LQ9UJW3 386 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 NAGPAQ9UK23 515 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
COL4A3-205ENST00000471862 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 O00370 1275 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
COL4A3-205ENST00000471862 STC2O76061 302 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 EPN2O95208 641 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 VDRP11473 427 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 TNFRSF4P43489 277 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 BCAT1P54687 386 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
COL4A3-205ENST00000471862 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 FOXK2Q01167 660 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 LMNB2Q03252 620 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 KDSRQ06136 332 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 PDE4CQ08493 712 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 LRMPQ12912 555 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 PAK1Q13153 545 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 CRY1Q16526 586 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 CSRP2Q16527 193 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 RSPO4Q2I0M5 234 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-205ENST00000471862 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 SGO2Q562F6 1265 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 KBTBD6Q86V97 674 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 KAT5Q92993 513 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 DUSP15Q9H1R2 295 aaPredicted RBP12.11□□□□□ -0.47
COL4A3-205ENST00000471862 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 LSM7Q9UK45 103 aaKnown RBP12.11□□□□□ -0.47
COL4A3-205ENST00000471862 HCN2Q9UL51 889 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 USP18Q9UMW8 372 aa12.11□□□□□ -0.47
COL4A3-205ENST00000471862 NUP205Q92621 2012 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms