RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
DMD-219ENST00000471779 SPATA18Q8TC71 538 aa3□□□□□ -1.93
DMD-219ENST00000471779 UBASH3BQ8TF42 649 aa3□□□□□ -1.93
DMD-219ENST00000471779 HASPINQ8TF76 798 aa3□□□□□ -1.93
DMD-219ENST00000471779 GDPD5Q8WTR4 605 aa3□□□□□ -1.93
DMD-219ENST00000471779 C2orf15Q8WU43 125 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 BCL7CQ8WUZ0 217 aaPredicted RBP3□□□□□ -1.93
DMD-219ENST00000471779 HNRNPLLQ8WVV9 542 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 MYLIPQ8WY64 445 aa3□□□□□ -1.93
DMD-219ENST00000471779 CASP10Q92851 521 aa3□□□□□ -1.93
DMD-219ENST00000471779 JAKMIP2Q96AA8 810 aa3□□□□□ -1.93
DMD-219ENST00000471779 CNOT6LQ96LI5 555 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 RIPOR3Q96MK2 946 aa3□□□□□ -1.93
DMD-219ENST00000471779 ZMAT2Q96NC0 199 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 SPAG5Q96R06 1193 aa3□□□□□ -1.93
DMD-219ENST00000471779 BPIFA3Q9BQP9 254 aa3□□□□□ -1.93
DMD-219ENST00000471779 ACBD6Q9BR61 282 aa3□□□□□ -1.93
DMD-219ENST00000471779 RSRP1Q9BUV0 290 aa3□□□□□ -1.93
DMD-219ENST00000471779 NUP58Q9BVL2 599 aa3□□□□□ -1.93
DMD-219ENST00000471779 HERC2P3Q9BVR0 1158 aa3□□□□□ -1.93
DMD-219ENST00000471779 FGFBP2Q9BYJ0 223 aa3□□□□□ -1.93
DMD-219ENST00000471779 GPR62Q9BZJ7 368 aa3□□□□□ -1.93
DMD-219ENST00000471779 MTMR12Q9C0I1 747 aa3□□□□□ -1.93
DMD-219ENST00000471779 HAPLN2Q9GZV7 340 aa3□□□□□ -1.93
DMD-219ENST00000471779 VPS16Q9H269 839 aa3□□□□□ -1.93
DMD-219ENST00000471779 IKZF4Q9H2S9 585 aa3□□□□□ -1.93
DMD-219ENST00000471779 NDST4Q9H3R1 872 aa3□□□□□ -1.93
DMD-219ENST00000471779 FAM124BQ9H5Z6 455 aaPredicted RBP3□□□□□ -1.93
DMD-219ENST00000471779 CYP3A43Q9HB55 503 aa3□□□□□ -1.93
DMD-219ENST00000471779 CYP4F11Q9HBI6 524 aa3□□□□□ -1.93
DMD-219ENST00000471779 RXFP1Q9HBX9 757 aa3□□□□□ -1.93
DMD-219ENST00000471779 LRRC4CQ9HCJ2 640 aa3□□□□□ -1.93
DMD-219ENST00000471779 UBE2TQ9NPD8 197 aaPredicted RBP3□□□□□ -1.93
DMD-219ENST00000471779 CHST7Q9NS84 486 aa3□□□□□ -1.93
DMD-219ENST00000471779 SAMSN1Q9NSI8 373 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 DZANK1Q9NVP4 752 aa3□□□□□ -1.93
DMD-219ENST00000471779 GDAP2Q9NXN4 497 aa3□□□□□ -1.93
DMD-219ENST00000471779 CLDND1Q9NY35 253 aa3□□□□□ -1.93
DMD-219ENST00000471779 FAM8A1Q9UBU6 413 aa3□□□□□ -1.93
DMD-219ENST00000471779 HESX1Q9UBX0 185 aa3□□□□□ -1.93
DMD-219ENST00000471779 ZC3H7BQ9UGR2 993 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 CDH9Q9ULB4 789 aa3□□□□□ -1.93
DMD-219ENST00000471779 TRIM33Q9UPN9 1127 aa3□□□□□ -1.93
DMD-219ENST00000471779 SLC5A6Q9Y289 635 aa3□□□□□ -1.93
DMD-219ENST00000471779 TLR6Q9Y2C9 796 aa3□□□□□ -1.93
DMD-219ENST00000471779 HIF3AQ9Y2N7 669 aa3□□□□□ -1.93
DMD-219ENST00000471779 TMA7Q9Y2S6 64 aaKnown RBP3□□□□□ -1.93
DMD-219ENST00000471779 PCDHB5Q9Y5E4 795 aa3□□□□□ -1.93
DMD-219ENST00000471779 PCDHB4Q9Y5E5 795 aa3□□□□□ -1.93
DMD-219ENST00000471779 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3□□□□□ -1.93
DMD-219ENST00000471779 TIMM13Q9Y5L4 95 aaPredicted RBP3□□□□□ -1.93
DMD-219ENST00000471779 BACE2Q9Y5Z0 518 aa3□□□□□ -1.93
DMD-219ENST00000471779 IRAK3Q9Y616 596 aa3□□□□□ -1.93
DMD-219ENST00000471779 MTCH2Q9Y6C9 303 aa3□□□□□ -1.93
DMD-219ENST00000471779 MYH15Q9Y2K3 1946 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 MICAL3Q7RTP6 2002 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 GTPBP10A4D1E9 387 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 I3L4J1 428 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 J3QW42 95 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 SOX1O00570 391 aaPredicted RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 TEX28O15482 410 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 DDX3YO15523 660 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 NRDCO43847 1150 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 FAM189A1O60320 539 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 GREM1O60565 184 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CLASP2O75122 1294 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 TACC1O75410 805 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 MAP3K6O95382 1288 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 FGF19O95750 216 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CYP11A1P05108 521 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 RNASE1P07998 156 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 CNPP09543 421 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 HNRNPA1P09651 372 aaKnown RBP eCLIP2.99□□□□□ -1.93
DMD-219ENST00000471779 WEE2P0C1S8 567 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 SPATA31D3P0C874 917 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 TRIM49P0CI25 452 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 TRIM49CP0CI26 452 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CSH1P0DML2 217 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CSH2P0DML3 217 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 VDRP11473 427 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 KRT5P13647 590 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 ATF2P15336 505 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CD19P15391 556 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 CD58P19256 250 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 TNFAIP3P21580 790 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 BMP6P22004 513 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 WARSP23381 471 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 TKTP29401 623 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 CDC25BP30305 580 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 KRT9P35527 623 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 DEKP35659 375 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 PBX3P40426 434 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 STAT1P42224 750 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 MTHFRP42898 656 aa2.99□□□□□ -1.93
DMD-219ENST00000471779 SSR1P43307 286 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 FXR1P51114 621 aaKnown RBP eCLIP2.99□□□□□ -1.93
DMD-219ENST00000471779 COPB1P53618 953 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 PMS1P54277 932 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 MRPS5P82675 430 aaKnown RBP2.99□□□□□ -1.93
DMD-219ENST00000471779 CYP27A1Q02318 531 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms