RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 EIF3BP55884 814 aaKnown RBP8.87□□□□□ -0.99
CD47-204ENST00000471694 RIOX2Q8IUF8 465 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 MAB21L3Q8N8X9 362 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 CCDC197Q8NCU1 140 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 ING5Q8WYH8 240 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.87□□□□□ -0.99
CD47-204ENST00000471694 SYBUQ9NX95 663 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 MBD5Q9P267 1494 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 SEPT4O43236 478 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 OR56A5P0C7T3 313 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 USP4Q13107 963 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 RESTQ13127 1097 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 HECTD3Q5T447 861 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 ZCCHC8Q6NZY4 707 aaKnown RBP8.87□□□□□ -0.99
CD47-204ENST00000471694 RNF14Q9UBS8 474 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 TRPM1Q7Z4N2 1603 aa8.87□□□□□ -0.99
CD47-204ENST00000471694 RHPN2P1A8MT19 583 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 NEDD8-MDP1E9PL57 170 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 RAMP2O60895 175 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 FMO5P49326 533 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 PKN2Q16513 984 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 TMEM164Q5U3C3 297 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 PARGQ86W56 976 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 FERD3LQ96RJ6 166 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 RIC8BQ9NVN3 520 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 OR6A2O95222 327 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 MCF2P10911 925 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CBWD3Q5JTY5 395 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CBWD5Q5RIA9 395 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CCDC33Q8N5R6 958 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 LPPQ93052 612 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 ADI1Q9BV57 179 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 MRPL42Q9Y6G3 142 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 EVPLLA8MZ36 301 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 RRP9O43818 475 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 AVILO75366 819 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 GABRR2P28476 465 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 SOX11P35716 441 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 MTA3Q9BTC8 594 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 AHSPQ9NZD4 102 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 MCM8Q9UJA3 840 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 SLC27A5Q9Y2P5 690 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 TEX28O15482 410 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 VIL1P09327 827 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 BST2Q10589 180 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 CUL2Q13617 745 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 USP39Q53GS9 565 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 ZNF579Q8NAF0 562 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 MAGEC3Q8TD91 643 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 C11orf84Q9BUA3 381 aaPredicted RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 FICDQ9BVA6 458 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CSH1P0DML2 217 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CSH2P0DML3 217 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 CYP11B2P19099 503 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 HOXC12P31275 282 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 GLUD2P49448 558 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 DENND1CQ8IV53 801 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 GPR135Q8IZ08 494 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 SYT2Q8N9I0 419 aaPredicted RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 SERPINB11Q96P15 392 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 RERGLQ9H628 205 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 THEGQ9P2T0 379 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 EIF3LQ9Y262 564 aaKnown RBP8.86□□□□□ -0.99
CD47-204ENST00000471694 PCDHB2Q9Y5E7 798 aa8.86□□□□□ -0.99
CD47-204ENST00000471694 PSMD8P48556 350 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 SNRPD1P62314 119 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 CATSPERGQ6ZRH7 1159 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 DENND5BQ6ZUT9 1274 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 LRRC8AQ8IWT6 810 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 TSTD1Q8NFU3 115 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 BBS4Q96RK4 519 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 GALNT8Q9NY28 637 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ANAPC2Q9UJX6 822 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 PLA2G6O60733 806 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 FSBPO95073 299 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CPSF4O95639 269 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 CLTBP09497 229 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 FOSL2P15408 326 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 TAL1P17542 331 aaPredicted RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 SERPINA4P29622 427 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CARSP49589 748 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 SP2Q02086 613 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ANGPT1Q15389 498 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 TEDDM1Q5T9Z0 273 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 LRRC8DQ7L1W4 858 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 DET1Q7L5Y6 550 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 B3GALNT2Q8NCR0 500 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 FAF1Q9UNN5 650 aaPredicted RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 NOVA2Q9UNW9 492 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 CLTCL1P53675 1640 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 SERPINB4P48594 390 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 AASDHQ4L235 1098 aaPredicted RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 CACHD1Q5VU97 1274 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 MCRS1Q96EZ8 462 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 KCTD10Q9H3F6 313 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 OR10H2O60403 315 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 FSTL1Q12841 308 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms