RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 TMC5Q6UXY8 1006 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 RTL10Q7L3V2 364 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 ELMOD1Q8N336 334 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 CASP10Q92851 521 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 TRMT2BQ96GJ1 504 aaKnown RBP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 SLITRK1Q96PX8 696 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 RAB6CQ9H0N0 254 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 POPDC2Q9HBU9 364 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 ZDHHC7Q9NXF8 308 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 DPP7Q9UHL4 492 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 HYOU1Q9Y4L1 999 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 ZNF638Q14966 1978 aaKnown RBP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 GRID2IPA4D2P6 1211 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 DAB1O75553 588 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 HNRNPA1P09651 372 aaKnown RBP eCLIP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 ZDHHC11BP0C7U3 371 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 GPD1P21695 349 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 HOXA9P31269 272 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 ADAM15Q13444 863 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 C15orf59Q2T9L4 293 aaPredicted RBP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 DCAF6Q58WW2 860 aa20.09■□□□□ 0.81
PSPC1-203ENST00000471658 RNF10Q8N5U6 811 aaKnown RBP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 DDX23Q9BUQ8 820 aaKnown RBP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.09■□□□□ 0.81
PSPC1-203ENST00000471658 MYO16Q9Y6X6 1858 aa20.08■□□□□ 0.81
PSPC1-203ENST00000471658 ZNF840PA6NDX5 716 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 MYO1FO00160 1098 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 PALMO75781 387 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 TBX18O95935 607 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 MYL4P12829 197 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 NCAM1P13591 858 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 GJA1P17302 382 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 CCR2P41597 374 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 MATKP42679 507 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 RARS2Q5T160 578 aaKnown RBP20.08■□□□□ 0.8
PSPC1-203ENST00000471658 GAREM2Q75VX8 874 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 MYLIPQ8WY64 445 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 GOLGA1Q92805 767 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 GAS2L1Q99501 681 aaPredicted RBP20.08■□□□□ 0.8
PSPC1-203ENST00000471658 TLR8Q9NR97 1041 aaKnown RBP20.08■□□□□ 0.8
PSPC1-203ENST00000471658 EHD2Q9NZN4 543 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 CALCOCO1Q9P1Z2 691 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 CDH22Q9UJ99 828 aa20.08■□□□□ 0.8
PSPC1-203ENST00000471658 GOLGA6L9A6NEM1 432 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 CAPN9O14815 690 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 RARGP13631 454 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 PTPN2P17706 415 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 PSMA2P25787 234 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 GABRR2P28476 465 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 ZNF143P52747 638 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-203ENST00000471658 ATP11AP98196 1134 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 DLX2Q07687 328 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-203ENST00000471658 SYCE2Q6PIF2 218 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 TMEM184AQ6ZMB5 413 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 ARCQ7LC44 396 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 GRASPQ7Z6J2 395 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-203ENST00000471658 LRRC57Q8N9N7 239 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 ADAM32Q8TC27 787 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 TCEAL4Q96EI5 215 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 TBCBQ99426 244 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 CCSER2Q9H7U1 834 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 ABCC13Q9NSE7 274 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.07■□□□□ 0.8
PSPC1-203ENST00000471658 TRPM5Q9NZQ8 1165 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 UXTQ9UBK9 157 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-203ENST00000471658 USTQ9Y2C2 406 aa20.07■□□□□ 0.8
PSPC1-203ENST00000471658 MDM4O15151 490 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 XYLBO75191 536 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 PROSCO94903 275 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 RHOP08100 348 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 MSNP26038 577 aaKnown RBP20.06■□□□□ 0.8
PSPC1-203ENST00000471658 NOS2P35228 1153 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ATXN1P54253 815 aaKnown RBP20.06■□□□□ 0.8
PSPC1-203ENST00000471658 CYP4F8P98187 520 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 CDO1Q16878 200 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ZNF569Q5MCW4 686 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 OTUD1Q5VV17 481 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ANKRD54Q6NXT1 300 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ELMSAN1Q6PJG2 1045 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 EP400NLQ6ZTU2 488 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 DAAM2Q86T65 1068 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ARHGAP18Q8N392 663 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ARFGAP1Q8N6T3 406 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 OVCA2Q8WZ82 227 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 SMG7Q92540 1137 aaKnown RBP20.06■□□□□ 0.8
PSPC1-203ENST00000471658 CDX2Q99626 313 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-203ENST00000471658 SFXN1Q9H9B4 322 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 ASAH2Q9NR71 780 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 DZANK1Q9NVP4 752 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 CLEC1BQ9P126 229 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 IP6K2Q9UHH9 426 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 DOCK6Q96HP0 2047 aa20.06■□□□□ 0.8
PSPC1-203ENST00000471658 A0A1W2PRU2 124 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 C2orf78A6NCI8 922 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 DPYSL4O14531 572 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SDC4P31431 198 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SULT1E1P49888 294 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 SLC5A9Q2M3M2 681 aa20.05■□□□□ 0.8
PSPC1-203ENST00000471658 PDZD8Q8NEN9 1154 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms