RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-228	ENST00000471635	FAM204A	Q9H8W3	233 aa		4.61	□□□□□ -1.67
RBM39-228	ENST00000471635	TRIM36	Q9NQ86	728 aa		4.61	□□□□□ -1.67
RBM39-228	ENST00000471635	COL20A1	Q9P218	1284 aa		4.61	□□□□□ -1.67
RBM39-228	ENST00000471635	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.61	□□□□□ -1.67
RBM39-228	ENST00000471635	OGDHL	Q9ULD0	1010 aa		4.61	□□□□□ -1.67
RBM39-228	ENST00000471635	TRIP12	Q14669	1992 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635		H3BNC9	293 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	CLIC1	O00299	241 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	INSIG1	O15503	277 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	FRS3	O43559	492 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	MAP4K4	O95819	1239 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	PARP1	P09874	1014 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	IL1R1	P14778	569 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	ATF7	P17544	494 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	TPH1	P17752	444 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	CACNB3	P54284	484 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	FMO1	Q01740	532 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	CFHR3	Q02985	330 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	SLC14A1	Q13336	389 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	KCNAB1	Q14722	419 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	TMEM63B	Q5T3F8	832 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	ANO7	Q6IWH7	933 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	CCDC149	Q6ZUS6	474 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	NGDN	Q8NEJ9	315 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	LRTOMT	Q8WZ04	291 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	KRTAP4-4	Q9BYR3	166 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	CHST8	Q9H2A9	424 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	DHX36	Q9H2U1	1008 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	EBF3	Q9H4W6	596 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	USP29	Q9HBJ7	922 aa		4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	DDX20	Q9UHI6	824 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-228	ENST00000471635	LY6G6E	A0A0G2JKS1	128 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	AQP7P3	A6NL99	342 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	FYB1	O15117	783 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	TXN	P10599	105 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	CD19	P15391	556 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	SCP2	P22307	547 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	YY1	P25490	414 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	LINC00205	P59089	165 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	YPEL5	P62699	121 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	PPP2R5A	Q15172	486 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	RNF220	Q5VTB9	566 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	PPP4R4	Q6NUP7	873 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	CLEC9A	Q6UXN8	241 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	USP49	Q70CQ1	688 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	YAF2	Q8IY57	180 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	C12orf76	Q8N812	135 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	NSMCE1	Q8WV22	266 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	EDC3	Q96F86	508 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	HIST1H2AA	Q96QV6	131 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	LRRC27	Q9C0I9	530 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	ZNF287	Q9HBT7	754 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	MAFF	Q9ULX9	164 aa		4.59	□□□□□ -1.67
RBM39-228	ENST00000471635	ZMYM2	Q9UBW7	1377 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635		A8MVJ9	347 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	CA12	O43570	354 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	TLR2	O60603	784 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	MYF5	P13349	255 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	ADRA1D	P25100	572 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	TKT	P29401	623 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	THBS4	P35443	961 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	CARS	P49589	748 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	HTRA4	P83105	476 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	TXNL4A	P83876	142 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	CFHR1	Q03591	330 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	RAPGEF1	Q13905	1077 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	ST3GAL2	Q16842	350 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	PLEKHG6	Q3KR16	790 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	PLAG1	Q6DJT9	500 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	UNC13D	Q70J99	1090 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	SESTD1	Q86VW0	696 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	ANKRD13B	Q86YJ7	626 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	MAGEB6	Q8N7X4	407 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	PNPLA1	Q8N8W4	532 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	FAM156A	Q8NDB6	213 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	APIP	Q96GX9	242 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	ZNF668	Q96K58	619 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	GAR1	Q9NY12	217 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	DKK4	Q9UBT3	224 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	STEAP1	Q9UHE8	339 aa		4.58	□□□□□ -1.68
RBM39-228	ENST00000471635	CKAP5	Q14008	2032 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	EVPL	Q92817	2033 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	SNX2	O60749	519 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	CTSA	P10619	480 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	BTF3	P20290	206 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	TACR3	P29371	465 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	EIF4A1	P60842	406 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	RPS13	P62277	151 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	GPC5	P78333	572 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	KPNB1	Q14974	876 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	POLD3	Q15054	466 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	NFE2	Q16621	373 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	KIAA0753	Q2KHM9	967 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	SLC9C1	Q4G0N8	1177 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	PIP4P1	Q86T03	277 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	ZDHHC17	Q8IUH5	632 aa		4.57	□□□□□ -1.68
RBM39-228	ENST00000471635	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms