RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 MED10Q9BTT4 135 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 GPR174Q9BXC1 333 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 KIAA1522Q9P206 1035 aaPredicted RBP13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 DKK4Q9UBT3 224 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 STARD13Q9Y3M8 1113 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 LAMA5O15230 3695 aa13.26□□□□□ -0.29
HIGD1A-205ENST00000470543 A8MXQ7 604 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 BCAT2O15382 392 aaPredicted RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 CBFA2T3O75081 653 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 CILPO75339 1184 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 ZNF883P0CG24 379 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 TYRP14679 529 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 PTPN1P18031 435 aaKnown RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 TXLNAP40222 546 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 DGKGP49619 791 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 TUBP50607 506 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 TPGS1Q6ZTW0 290 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 CCSER2Q9H7U1 834 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.294e-6■■■■■ 72.1
HIGD1A-205ENST00000470543 WDR35Q9P2L0 1181 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 FNDC3AQ9Y2H6 1198 aaKnown RBP13.25□□□□□ -0.29
HIGD1A-205ENST00000470543 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 TRABD2BA6NFA1 517 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 CLDN5O00501 218 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 KIAA0391O15091 583 aaKnown RBP13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 CACNG3O60359 315 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 ATXN1LP0C7T5 689 aaKnown RBP13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 ACADMP11310 421 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 DCAF12L1Q5VU92 463 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 SCUBE3Q8IX30 993 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 PIP4K2CQ8TBX8 421 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 BHMTQ93088 406 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 DPEP3Q9H4B8 488 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 GMIPQ9P107 970 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 CHORDC1Q9UHD1 332 aaPredicted RBP13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 NFE2L3Q9Y4A8 694 aa13.24□□□□□ -0.29
HIGD1A-205ENST00000470543 SMG1Q96Q15 3661 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 FLNBO75369 2602 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 FAM149AA5PLN7 773 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 GFRA2O00451 464 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 SYNCRIPO60506 623 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 TACC1O75410 805 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 PRB1P04280 392 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 DLATP10515 647 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 TNNI1P19237 187 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 CASP5P51878 434 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 SLC5A3P53794 718 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 GRIN1Q05586 938 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 HLA-BQ31612 363 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 SV2BQ7L1I2 683 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 LIMS2Q7Z4I7 341 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 CACUL1Q86Y37 369 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 CRELD1Q96HD1 420 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 STRA6Q9BX79 667 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 OLFML3Q9NRN5 406 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 WSB2Q9NYS7 404 aaPredicted RBP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 HCN2Q9UL51 889 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 TMEM131Q92545 1883 aa13.23□□□□□ -0.29
HIGD1A-205ENST00000470543 A0A087WV48 116 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 TLR5O60602 858 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 OXTRP30559 389 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 TRPC3Q13507 836 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 TEAD4Q15561 434 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 INAVAQ3KP66 663 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 FUT11Q495W5 492 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 LRRC69Q6ZNQ3 347 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 UCMAQ8WVF2 138 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 PRCCQ92733 491 aaPredicted RBP13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
HIGD1A-205ENST00000470543 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms