RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 DNAJB2P25686 324 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 ELF1P32519 619 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 PTPN7P35236 360 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 GPR15P49685 360 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 HDAC4P56524 1084 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 ERVK-21P61565 698 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 YWHAGP61981 247 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL4A5-203ENST00000470339 ATP11AP98196 1134 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 SMC1AQ14683 1233 aaKnown RBP15.8■□□□□ 0.12
COL4A5-203ENST00000470339 DAB2IPQ5VWQ8 1189 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 HFE2Q6ZVN8 426 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 RTL10Q7L3V2 364 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 PSTKQ8IV42 348 aaKnown RBP15.8■□□□□ 0.12
COL4A5-203ENST00000470339 ZNF276Q8N554 614 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 MRPL43Q8N983 215 aaKnown RBP15.8■□□□□ 0.12
COL4A5-203ENST00000470339 MS4A14Q96JA4 679 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 NAALADL1Q9UQQ1 740 aa15.8■□□□□ 0.12
COL4A5-203ENST00000470339 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
COL4A5-203ENST00000470339 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
COL4A5-203ENST00000470339 SLC38A8A6NNN8 435 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 EFCAB8A8MWE9 144 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 GRXCR1A8MXD5 290 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 CSH1P0DML2 217 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 CSH2P0DML3 217 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 NCAM1P13591 858 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 IL1R2P27930 398 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 BMP8BP34820 402 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 GTF2F1P35269 517 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL4A5-203ENST00000470339 ALDH1A3P47895 512 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 SULT1E1P49888 294 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 AIF1P55008 147 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 PLD1Q13393 1074 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 ODF2Q5BJF6 829 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 SH3PXD2AQ5TCZ1 1133 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 SYPL2Q5VXT5 272 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 BTBD8Q5XKL5 378 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 LILRA6Q6PI73 481 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 SCD5Q86SK9 330 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 VSIG1Q86XK7 387 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 POF1BQ8WVV4 589 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 MAIP1Q8WWC4 291 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 OVCA2Q8WZ82 227 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 KLHL5Q96PQ7 755 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 TCF25Q9BQ70 676 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 CYP4F11Q9HBI6 524 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 ALG13Q9NP73 1137 aaKnown RBP15.79■□□□□ 0.12
COL4A5-203ENST00000470339 TLR9Q9NR96 1032 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 EFR3BQ9Y2G0 817 aa15.79■□□□□ 0.12
COL4A5-203ENST00000470339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 C2orf71A6NGG8 1288 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 M0QYT0 321 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 PRRG1O14668 218 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 FSCN2O14926 492 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 MDM4O15151 490 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 LPXNO60711 386 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 TADA3O75528 432 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 FGGP02679 453 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 CA3P07451 260 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 MYOGP15173 224 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 TCF4P15884 667 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ATF6P18850 670 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 GBP1P32455 592 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 RDXP35241 583 aaKnown RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ERVFC1P60507 584 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ZNF211Q13398 564 aaPredicted RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 RAB30Q15771 203 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 PPP2R5EQ16537 467 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 TAZQ16635 292 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 CDO1Q16878 200 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 SDHAF4Q5VUM1 108 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 FAM109BQ6ICB4 259 aaPredicted RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 MSANTD2Q6P1R3 559 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 CYP4V2Q6ZWL3 525 aaPredicted RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 SLC13A5Q86YT5 568 aaPredicted RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 PDZD8Q8NEN9 1154 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 SPATA4Q8NEY3 305 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 TLR8Q9NR97 1041 aaKnown RBP15.78■□□□□ 0.12
COL4A5-203ENST00000470339 PCSK1NQ9UHG2 260 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
COL4A5-203ENST00000470339 ZNF487B1APH4 448 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 H3BNC9 293 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 CCDC188H7C350 402 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 CTIFO43310 598 aaKnown RBP15.77■□□□□ 0.12
COL4A5-203ENST00000470339 SOAT2O75908 522 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 IGLV3-25P01717 112 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 RARAP10276 462 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 TFE3P19532 575 aaPredicted RBP15.77■□□□□ 0.12
COL4A5-203ENST00000470339 KDELR1P24390 212 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 DNAJB1P25685 340 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 PPP3CCP48454 512 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 EPHB3P54753 998 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 USP46P62068 366 aa15.77■□□□□ 0.12
COL4A5-203ENST00000470339 DEUP1Q05D60 604 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms