RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GSTA1P08263 222 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CPA1P15085 419 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CHN1P15882 459 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RAG1P15918 1043 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ACADSP16219 412 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ATF4P18848 351 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CCNA2P20248 432 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ITGAXP20702 1163 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ATP6V1C1P21283 382 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GSTM2P28161 218 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 LRPAP1P30533 357 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PKLRP30613 574 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 HSPA9P38646 679 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 WNT5AP41221 380 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 MAP2K3P46734 347 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GSSP48637 474 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 HARS2P49590 506 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 HNRNPFP52597 415 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ZNF135P52742 658 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 P2RX3P56373 397 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CARD18P57730 90 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RPS3AP61247 264 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RNF4P78317 190 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ELF3P78545 371 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PLD1Q13393 1074 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PWP1Q13610 501 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ODF1Q14990 250 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TSC22D1Q15714 1073 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PHKG1Q16816 387 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PLA2G4EQ3MJ16 856 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GTDC1Q4AE62 458 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SLC39A12Q504Y0 691 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RNFT1Q5M7Z0 435 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 FOXB2Q5VYV0 432 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ALS2CLQ60I27 953 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GPR139Q6DWJ6 353 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 FAM109BQ6ICB4 259 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SPOPLQ6IQ16 392 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PSAPL1Q6NUJ1 521 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PAPD4Q6PIY7 484 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 LRIG3Q6UXM1 1119 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 Q6ZUG5 572 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GLRX5Q86SX6 157 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ZDHHC17Q8IUH5 632 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 DIS3L2Q8IYB7 885 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 NUP93Q8N1F7 819 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 BBS5Q8N3I7 341 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RAB3IL1Q8TBN0 382 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PLEKHO2Q8TD55 490 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ASZ1Q8WWH4 475 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CCT6BQ92526 530 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 WASF1Q92558 559 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GPRASP2Q96D09 838 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RHOVQ96L33 236 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CNOT6LQ96LI5 555 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CFAP57Q96MR6 1250 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 AIFM3Q96NN9 605 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TMEM237Q96Q45 408 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 DEPDC7Q96QD5 511 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 BBS4Q96RK4 519 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 EYA3Q99504 573 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CHCHD6Q9BRQ6 235 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CENPKQ9BS16 269 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SPATA16Q9BXB7 569 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CLEC4MQ9H2X3 399 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 DPEP3Q9H4B8 488 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SP110Q9HB58 689 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RC3H2Q9HBD1 1191 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ZFYVE1Q9HBF4 777 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 INTS9Q9NV88 658 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 RRN3Q9NYV6 651 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 KLHL9Q9P2J3 617 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SRP68Q9UHB9 627 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TINAGQ9UJW2 476 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GGA1Q9UJY5 639 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TLK1Q9UKI8 766 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ANGPTL2Q9UKU9 493 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SNX7Q9UNH6 387 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TBC1D30Q9Y2I9 924 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 IFT52Q9Y366 437 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 USP16Q9Y5T5 823 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ZFP37Q9Y6Q3 630 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 MAP3K1Q13233 1512 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 NUP160Q12769 1436 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 TEX51A0A1B0GUA7 166 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 hCG_1642624A0A1W2PR95 340 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CTAGE15A4D2H0 777 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SMCO2A6NFE2 343 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 SHOXO15266 292 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CNOT3O75175 753 aaKnown RBP5.32□□□□□ -1.56
COL3A1-205ENST00000470167 CBR3O75828 277 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PIAS2O75928 621 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 BMP10O95393 424 aa5.32□□□□□ -1.56
COL3A1-205ENST00000470167 PLEKHA8P1O95397 391 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms