RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 EIF2DP41214 584 aaKnown RBP17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 PSEN1P49768 467 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 SLC8A3P57103 927 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 GAD2Q05329 585 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 DMC1Q14565 340 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 LAIR1Q6GTX8 287 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 PIGZQ86VD9 579 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 TMEM25Q86YD3 366 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 TRIM59Q8IWR1 403 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 CAMKK1Q8N5S9 505 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 NAT16Q8N8M0 369 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 CCDC26Q8TAB7 109 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 ACDQ96AP0 544 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 NT5C1BQ96P26 610 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 SPHK2Q9NRA0 654 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 TSPAN16Q9UKR8 245 aa17.24■□□□□ 0.35
GTF3C2-209ENST00000470115 CCDC163A0A0D9SF12 145 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 KAT7O95251 611 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 GNA14O95837 355 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 APODP05090 189 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 RALAP11233 206 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 ID4P47928 161 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 KDSRQ06136 332 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 PDE4CQ08493 712 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 ANO4Q32M45 955 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 RAB41Q5JT25 222 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 BTBD8Q5XKL5 378 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 KLHDC10Q6PID8 442 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 TMEM270Q6UE05 265 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 PPM1KQ8N3J5 372 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 CCDC33Q8N5R6 958 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 EHBP1Q8NDI1 1231 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 UBA3Q8TBC4 463 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 KAT5Q92993 513 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 ARHGEF4Q9NR80 690 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 CLIC5Q9NZA1 410 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 HESX1Q9UBX0 185 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 LSM7Q9UK45 103 aaKnown RBP17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 PCDHB4Q9Y5E5 795 aa17.23■□□□□ 0.35
GTF3C2-209ENST00000470115 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 P4HA2O15460 535 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 HOXC11O43248 304 aaPredicted RBP17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 VDRP11473 427 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 TGM1P22735 817 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 GRIA2P42262 883 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 TKTL1P51854 596 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 BCAT1P54687 386 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 GOLGA8FQ08AF8 430 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 GOLGA8DPQ0D2H9 430 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 CETN1Q12798 172 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 EMC10Q5UCC4 262 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 RRAGAQ7L523 313 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 MIB1Q86YT6 1006 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 ETFBKMTQ8IXQ9 262 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 PHTF2Q8N3S3 785 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 GAB3Q8WWW8 586 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 NDRG1Q92597 394 aaKnown RBP17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 KIAA1257Q9ULG3 409 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 DCHS1Q96JQ0 3298 aa17.22■□□□□ 0.35
GTF3C2-209ENST00000470115 CEP250Q9BV73 2442 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 O00370 1275 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 AXIN1O15169 862 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TULP3O75386 442 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 RPP40O75818 363 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 STC2O76061 302 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 APBB3O95704 486 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 ZBED1O96006 694 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 RETP07949 1114 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TIE1P35590 1138 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TNFRSF4P43489 277 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 MARSP56192 900 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 BST2Q10589 180 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 EFEMP1Q12805 493 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 PM20D1Q6GTS8 502 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TADA2BQ86TJ2 420 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 ARHGAP18Q8N392 663 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 FAM160A2Q8N612 972 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TFAP2BQ92481 460 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 RMDN1Q96DB5 314 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 GBP4Q96PP9 640 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 ULBP1Q9BZM6 244 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 DEC1Q9P2X7 70 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 USP18Q9UMW8 372 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 KIAA1549LQ6ZVL6 1849 aa17.21■□□□□ 0.35
GTF3C2-209ENST00000470115 TBC1D3BA6NDS4 549 aa17.2■□□□□ 0.34
GTF3C2-209ENST00000470115 TRIM24O15164 1050 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms