RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 XYLT2Q9H1B5 865 aa14.39□□□□□ -0.11
LINC00173-201ENST00000470091 EBF3Q9H4W6 596 aa14.39□□□□□ -0.11
LINC00173-201ENST00000470091 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
LINC00173-201ENST00000470091 ITGA11Q9UKX5 1188 aa14.39□□□□□ -0.11
LINC00173-201ENST00000470091 L1RE1Q9UN81 338 aa14.39□□□□□ -0.11
LINC00173-201ENST00000470091 SNX9Q9Y5X1 595 aa14.39□□□□□ -0.11
LINC00173-201ENST00000470091 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.39□□□□□ -0.11
LINC00173-201ENST00000470091 OTOL1A6NHN0 477 aaPredicted RBP14.38□□□□□ -0.11
LINC00173-201ENST00000470091 CCP110O43303 1012 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 KRT5P13647 590 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 ARSAP15289 507 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 SDHBP21912 280 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 WEE1P30291 646 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 RBP5P82980 135 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 RUNX3Q13761 415 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
LINC00173-201ENST00000470091 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 LAIR1Q6GTX8 287 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 CEP68Q76N32 757 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 LONP2Q86WA8 852 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 SCN4BQ8IWT1 228 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 MRPS31Q92665 395 aaKnown RBP14.38□□□□□ -0.11
LINC00173-201ENST00000470091 FAM81BQ96LP2 452 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 CYP2S1Q96SQ9 504 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 FAM83CQ9BQN1 747 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 TRPC7Q9HCX4 862 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 TDP1Q9NUW8 608 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 R3HCC1Q9Y3T6 440 aaKnown RBP14.38□□□□□ -0.11
LINC00173-201ENST00000470091 BZW2Q9Y6E2 419 aaKnown RBP14.38□□□□□ -0.11
LINC00173-201ENST00000470091 ATG2BQ96BY7 2078 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 COL4A2P08572 1712 aa14.38□□□□□ -0.11
LINC00173-201ENST00000470091 CYP26A1O43174 497 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 ATP2C2O75185 946 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 IPO7O95373 1038 aaKnown RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 RETP07949 1114 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CCDC172P0C7W6 258 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CSH1P0DML2 217 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CSH2P0DML3 217 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 ACO1P21399 889 aaKnown RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 TBXAS1P24557 533 aaPredicted RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CYP27A1Q02318 531 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 GFPT1Q06210 699 aaPredicted RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CCINQ13939 588 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 SPA17Q15506 151 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 CC2D1AQ6P1N0 951 aaPredicted RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 MON1AQ86VX9 555 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 UBR7Q8N806 425 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 SLC20A1Q8WUM9 679 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 TAF4BQ92750 862 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 ACBD6Q9BR61 282 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 FBRSL1Q9HCM7 1045 aaKnown RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
LINC00173-201ENST00000470091 POLR3BQ9NW08 1133 aaPredicted RBP14.37□□□□□ -0.11
LINC00173-201ENST00000470091 EPG5Q9HCE0 2579 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 A0A087X0T9 212 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 CALCAP01258 141 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 FAM228BP0C875 321 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 CLCN1P35523 988 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 ASPAP45381 313 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 RPL10AP62906 217 aaKnown RBP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 GRSF1Q12849 480 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 ZNF667Q5HYK9 610 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 FSTL4Q6MZW2 842 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 KIAA1328Q86T90 577 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 SPATA2LQ8IUW3 424 aaPredicted RBP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 TMEM86AQ8N2M4 240 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 LRRC52Q8N7C0 313 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 RIN3Q8TB24 985 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 HPDLQ96IR7 371 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 SLC22A12Q96S37 553 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 NXF1Q9UBU9 619 aaKnown RBP14.36□□□□□ -0.11
LINC00173-201ENST00000470091 TFR2Q9UP52 801 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
LINC00173-201ENST00000470091 ACACBO00763 2458 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00173-201ENST00000470091 AXIN1O15169 862 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 LCA5LO95447 670 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 EGFP01133 1207 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 PDGFRBP09619 1106 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 CD58P19256 250 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 DDX6P26196 483 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00173-201ENST00000470091 ANXA13P27216 316 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 ATICP31939 592 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 CNR2P34972 360 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 LHX1P48742 406 aa14.35□□□□□ -0.11
LINC00173-201ENST00000470091 GALK1P51570 392 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms