RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GAP43P17677 238 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 GRIN1Q05586 938 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 TPGS1Q6ZTW0 290 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 LIMS2Q7Z4I7 341 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 GALNT15Q8N3T1 639 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 TOE1Q96GM8 510 aaKnown RBP20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 ZFRQ96KR1 1074 aaKnown RBP20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 CDC6Q99741 560 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 STRA6Q9BX79 667 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 BBS2Q9BXC9 721 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 TYRP14679 529 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 IDEP14735 1019 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 STARD3Q14849 445 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 IL27RAQ6UWB1 636 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 WBP2Q969T9 261 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 KIF2CQ99661 725 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 GABRG3Q99928 467 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 MED10Q9BTT4 135 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 DPEP3Q9H4B8 488 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 DKK4Q9UBT3 224 aa20.11■□□□□ 0.81
NCKIPSD-209ENST00000470006 PTPRJQ12913 1337 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 FAM149AA5PLN7 773 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 WASH3PC4AMC7 463 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 PRRT4C9JH25 899 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 BCAT2O15382 392 aaPredicted RBP20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 CLSTN1O94985 981 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 CASP5P51878 434 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 TNNC1P63316 161 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 SURF1Q15526 300 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 HLA-BQ31612 363 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 DCAF12L1Q5VU92 463 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 SCAMP5Q8TAC9 235 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 BHMTQ93088 406 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 UBL7Q96S82 380 aaPredicted RBP20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 B3GNT5Q9BYG0 378 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 TMEM30AQ9NV96 361 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 WDR35Q9P2L0 1181 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 FNDC3AQ9Y2H6 1198 aaKnown RBP20.1■□□□□ 0.81
NCKIPSD-209ENST00000470006 ATP8B3O60423 1300 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 A8MXQ7 604 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 ZNF883P0CG24 379 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 ABCG1P45844 678 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 SUZ12Q15022 739 aaKnown RBP20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 SV2BQ7L1I2 683 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 SCUBE3Q8IX30 993 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 PIP4K2CQ8TBX8 421 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 DNASE2BQ8WZ79 361 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 KCNK16Q96T55 309 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 CD248Q9HCU0 757 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 WSB2Q9NYS7 404 aaPredicted RBP20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 GMIPQ9P107 970 aa20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 LSM7Q9UK45 103 aaKnown RBP20.09■□□□□ 0.81
NCKIPSD-209ENST00000470006 FLRT2O43155 660 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 CACNG3O60359 315 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 BMP15O95972 392 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 DGKGP49619 791 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 ALCAMQ13740 583 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 WDR72Q3MJ13 1102 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 TRAPPC11Q7Z392 1133 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 B3GALNT2Q8NCR0 500 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 SNX19Q92543 992 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 EPSTI1Q96J88 318 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 TOR4AQ9NXH8 423 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 NME7Q9Y5B8 376 aa20.08■□□□□ 0.81
NCKIPSD-209ENST00000470006 KNL1Q8NG31 2342 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 A0A087WV48 116 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 GFRA2O00451 464 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 TACC1O75410 805 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 DLATP10515 647 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 TNNI1P19237 187 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 TUBP50607 506 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 SLC5A3P53794 718 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 GOLGA8FQ08AF8 430 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 GOLGA8DPQ0D2H9 430 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 FUT11Q495W5 492 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 RRAGBQ5VZM2 374 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 CBWD2Q8IUF1 395 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 PDCD7Q8N8D1 485 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 CADM4Q8NFZ8 388 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 SLC39A7Q92504 469 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 EIF2B4Q9UI10 523 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 NFE2L3Q9Y4A8 694 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 STON1Q9Y6Q2 735 aa20.07■□□□□ 0.8
NCKIPSD-209ENST00000470006 MYH10P35580 1976 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 A0A1B0GVT2 93 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 KIAA0391O15091 583 aaKnown RBP20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 SYNCRIPO60506 623 aaKnown RBP20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 CST3P01034 146 aaPredicted RBP20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 ACADMP11310 421 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 OXTRP30559 389 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 SNX30Q5VWJ9 437 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 HTR3DQ70Z44 454 aa20.06■□□□□ 0.8
NCKIPSD-209ENST00000470006 WDR49Q8IV35 697 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms