RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 GOLGA1Q92805 767 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 CWC15Q9P013 229 aaKnown RBP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 K7ESF4 209 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 STX10O60499 249 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 EXOC3O60645 756 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 DDX6P26196 483 aaKnown RBP eCLIP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 FOXK2Q01167 660 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 BMT2Q1RMZ1 405 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 DGKKQ5KSL6 1271 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 ERMP1Q7Z2K6 904 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 TRIM59Q8IWR1 403 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 POLR3BQ9NW08 1133 aaPredicted RBP12.3□□□□□ -0.44
FAM228B-203ENST00000469867 CDH9Q9ULB4 789 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 WNT6Q9Y6F9 365 aa12.3□□□□□ -0.44
FAM228B-203ENST00000469867 ANAPC1Q9H1A4 1944 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 RALGAPA1Q6GYQ0 2036 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 F8VP50 259 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 HRO43593 1189 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 NOL4O94818 638 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 MYL6P60660 151 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 PSMD6Q15008 389 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 NOA1Q8NC60 698 aaKnown RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 CGRRF1Q99675 332 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 DPEP3Q9H4B8 488 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 TMEM30AQ9NV96 361 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 RAB23Q9ULC3 237 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 USP18Q9UMW8 372 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 GREB1Q4ZG55 1949 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 TRAV19A0A0A6YYK7 116 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 PDXKO00764 312 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 SCAMP3O14828 347 aaKnown RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 HDCP19113 662 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 SPEM2Q0P670 501 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 TRPC3Q13507 836 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 SIM2Q14190 667 aaPredicted RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 RSPO4Q2I0M5 234 aaPredicted RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 DGLUCYQ7Z3D6 616 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 ZC3H3Q8IXZ2 948 aaKnown RBP12.29□□□□□ -0.44
FAM228B-203ENST00000469867 MYCBPAPQ8TBZ2 947 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 ERGIC2Q96RQ1 377 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 KIF9Q9HAQ2 790 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 FRYQ5TBA9 3013 aa12.29□□□□□ -0.44
FAM228B-203ENST00000469867 CFAP47Q6ZTR5 3102 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 ZSCAN12O43309 604 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 NRDCO43847 1150 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 MAGEA11P43364 429 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 TNNC1P63316 161 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 ZXDBP98169 803 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 BIRC3Q13489 604 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 MAPRE1Q15691 268 aaKnown RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 DCAF17Q5H9S7 520 aaPredicted RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 TMEM196Q5HYL7 178 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CNGA4Q8IV77 575 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 XYLT2Q9H1B5 865 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 LINC00597Q9H2U6 94 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 GMEB2Q9UKD1 530 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CAPN11Q9UMQ6 739 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 WDFY3Q8IZQ1 3526 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CLDN5O00501 218 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CETN3O15182 167 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 RNF40O75150 1001 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 USP17L7P0C7H9 530 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 TGM1P22735 817 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 GJA4P35212 333 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CDH8P55286 799 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 GSPT2Q8IYD1 628 aaKnown RBP12.28□□□□□ -0.44
FAM228B-203ENST00000469867 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
FAM228B-203ENST00000469867 NLRC4Q9NPP4 1024 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms