RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZC3H15Q8WU90 426 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 IQCGQ9H095 443 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 CPSF2Q9P2I0 782 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 PCNTO95613 3336 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 TRIM49D1C9J1S8 452 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 COPEO14579 308 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 GYG2O15488 501 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 GSC2O15499 205 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 DNAJC6O75061 913 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 GCLCP48506 637 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SERPINB4P48594 390 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 CDO1Q16878 200 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 FAM47CQ5HY64 1035 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 DSTYKQ6XUX3 929 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SLC26A11Q86WA9 606 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 PPM1NQ8N819 430 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 SPATA33Q96N06 139 aa16.42■□□□□ 0.22
TSPAN4-211ENST00000468468 MCM3APO60318 1980 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 KCNN4O15554 427 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 PDGFRAP16234 1089 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 SMYD5Q6GMV2 418 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 OR6B2Q6IFH4 312 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 CYP4V2Q6ZWL3 525 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 CNPY3Q9BT09 278 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 YIPF3Q9GZM5 350 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 PAK5Q9P286 719 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 LIN7AO14910 233 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 MYL2P10916 166 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 YWHAZP63104 245 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 KRT81Q14533 505 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 FAXCQ5TGI0 409 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 JADE1Q6IE81 842 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 RINLQ6ZS11 566 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 CDHR3Q6ZTQ4 885 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 EXOC8Q8IYI6 725 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 RNF157Q96PX1 679 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 SRPK1Q96SB4 655 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 MINDY3Q9H8M7 445 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 USP29Q9HBJ7 922 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 PNPLA8Q9NP80 782 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 TTLL3Q9Y4R7 772 aa16.41■□□□□ 0.22
TSPAN4-211ENST00000468468 GPR25O00155 361 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 PRPSAP2O60256 369 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 GRAP2O75791 330 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 SNUPNO95149 360 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 VDRP11473 427 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 ESRRAP11474 423 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 CAPRIN2Q6IMN6 1127 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 VPS52Q8N1B4 723 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 MCUR1Q96AQ8 359 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 HEY1Q9Y5J3 304 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 FAM237BA0A1B0GVD1 139 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 C2CD4BA6NLJ0 364 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 HMGCRP04035 888 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 ATP6V1C1P21283 382 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 CLCN3P51790 818 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 TTC7BQ86TV6 843 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 OXNAD1Q96HP4 312 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 OSBPL1AQ9BXW6 950 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 ZC3H7BQ9UGR2 993 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 TNFSF13BQ9Y275 285 aa16.4■□□□□ 0.22
TSPAN4-211ENST00000468468 CXorf49A8MYA2 514 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 SNRPAP09012 282 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 RBL1P28749 1068 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 SESN3P58005 492 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 EFCAB12Q6NXP0 572 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 FAM183BPQ6ZVS7 135 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 PLD5Q8N7P1 536 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MGAMO43451 1857 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 E5RJQ4 531 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 FCHO1O14526 889 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 LGR5O75473 907 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 KRT37O76014 449 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MAP3K6O95382 1288 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 C1QAP02745 245 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 KRT72Q14CN4 511 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 CCDC6Q16204 474 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 TSNAXIP1Q2TAA8 658 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MAP7D3Q8IWC1 876 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 SLC10A4Q96EP9 437 aa16.39■□□□□ 0.21
TSPAN4-211ENST00000468468 MECRQ9BV79 373 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms