RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 BCAT1P54687 386 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 GCNT1Q02742 428 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 MESP2Q0VG99 397 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 EFEMP1Q12805 493 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 SRSF5Q13243 272 aaKnown RBP12.13□□□□□ -0.47
CDHR3-205ENST00000468143 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 CNGA2Q16280 664 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ANO4Q32M45 955 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 LCLAT1Q6UWP7 414 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 HTR3DQ70Z44 454 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 TMEM25Q86YD3 366 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 RPLP0P6Q8NHW5 317 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 NELL1Q92832 810 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 EXOC4Q96A65 974 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 ACP6Q9NPH0 428 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
CDHR3-205ENST00000468143 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 WDFY4Q6ZS81 3184 aa12.13□□□□□ -0.47
CDHR3-205ENST00000468143 K7EQS6 105 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 M0QYV0 167 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 GREM1O60565 184 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 LILRB5O75023 590 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 ADH1CP00326 375 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 ERCC5P28715 1186 aaPredicted RBP12.12□□□□□ -0.47
CDHR3-205ENST00000468143 USP8P40818 1118 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PSEN1P49768 467 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 MFAP3P55082 362 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 GAD2Q05329 585 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 KDSRQ06136 332 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 LPAL2Q16609 132 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PMF1Q6P1K2 205 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
CDHR3-205ENST00000468143 BHLHA9Q7RTU4 235 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 KIAA1958Q8N8K9 716 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 EDEM1Q92611 657 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PNKPQ96T60 521 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
CDHR3-205ENST00000468143 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDHR3-205ENST00000468143 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 PCDHGA2Q9Y5H1 932 aa12.12□□□□□ -0.47
CDHR3-205ENST00000468143 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
CDHR3-205ENST00000468143 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
CDHR3-205ENST00000468143 SLC12A8A0AV02 714 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 YJEFN3A6XGL0 299 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 E7ENQ6 273 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 TRIM24O15164 1050 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 HRO43593 1189 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 ATG13O75143 517 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 STC2O76061 302 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
CDHR3-205ENST00000468143 KLKB1P03952 638 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
CDHR3-205ENST00000468143 PON1P27169 355 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 ZNF132P52740 706 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 NRLP54845 237 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 MAN2A1Q16706 1144 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 EXOC3L4Q17RC7 722 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 FBXO43Q4G163 708 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 TADA2BQ86TJ2 420 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 CCDC33Q8N5R6 958 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 KCTD13Q8WZ19 329 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 BHMTQ93088 406 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 OTUB2Q96DC9 234 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 FAM126AQ9BYI3 521 aaPredicted RBP12.11□□□□□ -0.47
CDHR3-205ENST00000468143 MIS12Q9H081 205 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 ZDHHC4Q9NPG8 344 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 SFMBT1Q9UHJ3 866 aa12.11□□□□□ -0.47
CDHR3-205ENST00000468143 AJAP1Q9UKB5 411 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms