RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TTI2Q6NXR4 508 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 ERMP1Q7Z2K6 904 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 BBS7Q8IWZ6 715 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 ARHGAP18Q8N392 663 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 USP33Q8TEY7 942 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 NELFBQ8WX92 580 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 SPHK2Q9NRA0 654 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 EBF1Q9UH73 591 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 NAGPAQ9UK23 515 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 KIAA1257Q9ULG3 409 aa20.09■□□□□ 0.81
COL7A1-207ENST00000467985 A0A0A0MRY4 1105 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 PRR5-ARHGAP8B1AHC4 643 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 P4HA2O15460 535 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 KAT7O95251 611 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 GNA14O95837 355 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 TBX18O95935 607 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 RALAP11233 206 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 BMP6P22004 513 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 GRIA2P42262 883 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 TNFRSF4P43489 277 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 PLA2G4AP47712 749 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 SLC6A11P48066 632 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 PXNP49023 591 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-207ENST00000467985 ARHGAP8P85298 464 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 HSF5Q4G112 596 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-207ENST00000467985 SGO2Q562F6 1265 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 C2orf27AQ580R0 203 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 C10orf120Q5SQS8 335 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 NUDT18Q6ZVK8 323 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 CACNA2D4Q7Z3S7 1137 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 HHIPQ96QV1 700 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 NMUR1Q9HB89 426 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 ARHGEF4Q9NR80 690 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 OSER1Q9NX31 292 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 HESX1Q9UBX0 185 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 USP18Q9UMW8 372 aa20.08■□□□□ 0.81
COL7A1-207ENST00000467985 AXIN1O15169 862 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 FOXD2O60548 495 aaPredicted RBP20.07■□□□□ 0.8
COL7A1-207ENST00000467985 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 BCAT1P54687 386 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 SEC13P55735 322 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 UBE2HP62256 183 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 PAK1Q13153 545 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 TRIML1Q8N9V2 468 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 LOXL4Q96JB6 756 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 DEC1Q9P2X7 70 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 MMP17Q9ULZ9 603 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 CTNND2Q9UQB3 1225 aa20.07■□□□□ 0.8
COL7A1-207ENST00000467985 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 BIN1O00499 593 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 FGFR1OPO95684 399 aaKnown RBP20.06■□□□□ 0.8
COL7A1-207ENST00000467985 TGM1P22735 817 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 HOXC13P31276 330 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 PUM1Q14671 1186 aaKnown RBP eCLIP20.06■□□□□ 0.8
COL7A1-207ENST00000467985 ANO4Q32M45 955 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 RAB41Q5JT25 222 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 SCD5Q86SK9 330 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 PIGZQ86VD9 579 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 ETFBKMTQ8IXQ9 262 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 FAM160A2Q8N612 972 aaPredicted RBP20.06■□□□□ 0.8
COL7A1-207ENST00000467985 TSTD1Q8NFU3 115 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 KCNV2Q8TDN2 545 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 RMDN1Q96DB5 314 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 WDR35Q9P2L0 1181 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 ZNF510Q9Y2H8 683 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 SPAG17Q6Q759 2223 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 MYOFQ9NZM1 2061 aa20.06■□□□□ 0.8
COL7A1-207ENST00000467985 LAMA1P25391 3075 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 GREM1O60565 184 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 VDRP11473 427 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 CD19P15391 556 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 DGKEP52429 567 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 COG7P83436 770 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 KDSRQ06136 332 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 SPEM2Q0P670 501 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 BST2Q10589 180 aaKnown RBP20.05■□□□□ 0.8
COL7A1-207ENST00000467985 LRMPQ12912 555 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 GOLGA7BQ2TAP0 167 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 C12orf40Q86WS4 652 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 TTC30AQ86WT1 665 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 TMEM25Q86YD3 366 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 UBR7Q8N806 425 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 WBP2Q969T9 261 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 POLR3BQ9NW08 1133 aaPredicted RBP20.05■□□□□ 0.8
COL7A1-207ENST00000467985 TSPAN16Q9UKR8 245 aa20.05■□□□□ 0.8
COL7A1-207ENST00000467985 TBC1D3BA6NDS4 549 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 XPO1O14980 1071 aaKnown RBP20.04■□□□□ 0.8
COL7A1-207ENST00000467985 TULP3O75386 442 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 ZBED1O96006 694 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 PAEPP09466 180 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 TKTL1P51854 596 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 MARSP56192 900 aaKnown RBP20.04■□□□□ 0.8
COL7A1-207ENST00000467985 CSRP2Q16527 193 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 PM20D1Q6GTS8 502 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 TRMT11Q7Z4G4 463 aaKnown RBP20.04■□□□□ 0.8
COL7A1-207ENST00000467985 C11orf74Q86VG3 221 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 MIB1Q86YT6 1006 aa20.04■□□□□ 0.8
COL7A1-207ENST00000467985 ZC3H10Q96K80 434 aaKnown RBP20.04■□□□□ 0.8
COL7A1-207ENST00000467985 XPO6Q96QU8 1125 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms