RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 MYLPFQ96A32 169 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 TRIM11Q96F44 468 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 MSANTD3Q96H12 275 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 SPATA17Q96L03 361 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 SNX25Q9H3E2 840 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 C8orf33Q9H7E9 229 aaPredicted RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 NOCTQ9UK39 431 aaKnown RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 NME7Q9Y5B8 376 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 A0A087X0T9 212 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 LAMTOR5O43504 91 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 RTN2O75298 545 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 TADA3O75528 432 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 H2AFZP0C0S5 128 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 FAM228BP0C875 321 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 VDRP11473 427 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 GNA15P30679 374 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 MTF1Q14872 753 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 TXNDC8Q6A555 127 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 H2AFVQ71UI9 128 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 REXO1L1PQ8IX06 675 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 MAB21L3Q8N8X9 362 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 CSGALNACT1Q8TDX6 532 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 MRPS31Q92665 395 aaKnown RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 TNIP3Q96KP6 325 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 PPP1R13BQ96KQ4 1090 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 ARID3AQ99856 593 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 SMG9Q9H0W8 520 aaKnown RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 ISCUQ9H1K1 167 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 SEMA4AQ9H3S1 761 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 SPATA6Q9NWH7 488 aaPredicted RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
CTNS-205ENST00000467663 NENFQ9UMX5 172 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 PCDHGC3Q9UN70 934 aa12.7□□□□□ -0.38
CTNS-205ENST00000467663 MYH10P35580 1976 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 A0A0A6YYK5 440 aaPredicted RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 ANKRD62A6NC57 917 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTNS-205ENST00000467663 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 BDNFP23560 247 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 AVPR1AP37288 418 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 GFPT1Q06210 699 aaPredicted RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 SLC47A2Q86VL8 602 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 RALGPS2Q86X27 583 aaPredicted RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 OR6B3Q8NGW1 331 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 ZNF606Q8WXB4 792 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 C8orf48Q96LL4 319 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 IER2Q9BTL4 223 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 MIS12Q9H081 205 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 LHX5Q9H2C1 402 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 CHRDQ9H2X0 955 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 KIF9Q9HAQ2 790 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 TDP1Q9NUW8 608 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 NDRG2Q9UN36 371 aaKnown RBP12.69□□□□□ -0.38
CTNS-205ENST00000467663 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
CTNS-205ENST00000467663 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
CTNS-205ENST00000467663 F5P12259 2224 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 A8MXQ7 604 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 THAP12O43422 761 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 KIF5CO60282 957 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CYP1A1P04798 512 aaPredicted RBP12.68□□□□□ -0.38
CTNS-205ENST00000467663 MYBL1P10243 752 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CHRNB1P11230 501 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CD58P19256 250 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CDH5P33151 784 aaPredicted RBP12.68□□□□□ -0.38
CTNS-205ENST00000467663 GRIK1P39086 918 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 KPNA1P52294 538 aaPredicted RBP12.68□□□□□ -0.38
CTNS-205ENST00000467663 RAD23BP54727 409 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 SNX16P57768 344 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 FMO1Q01740 532 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 TCEAL1Q15170 157 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 CNGA2Q16280 664 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
CTNS-205ENST00000467663 NYAP1Q6ZVC0 841 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 TMEM35BQ8NCS4 154 aa12.68□□□□□ -0.38
CTNS-205ENST00000467663 ACRBPQ8NEB7 543 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms