RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 KIF9Q9HAQ2 790 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 HPS4Q9NQG7 708 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 DLL3Q9NYJ7 618 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 UXTQ9UBK9 157 aaPredicted RBP7.54□□□□□ -1.2
SND1-205ENST00000467238 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 FRYQ5TBA9 3013 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 LAMA5O15230 3695 aa7.54□□□□□ -1.2
SND1-205ENST00000467238 UBE4BO95155 1302 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 ELOA3CA0A087WX78 387 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 OTOL1A6NHN0 477 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 ELOA3DA6NLF2 546 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 TGFB1I1O43294 461 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 TNNC2P02585 160 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 MAGEA11P43364 429 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 DMWDQ09019 674 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 MYO1EQ12965 1108 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 RUNX3Q13761 415 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 ZNF268Q14587 947 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 NUMA1Q14980 2115 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 ELOA3BQ3SY89 546 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 TRIM68Q6AZZ1 485 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 UNC13DQ70J99 1090 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 MON1AQ86VX9 555 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 SPATA2LQ8IUW3 424 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 WDR49Q8IV35 697 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 IQUBQ8NA54 791 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 ELOA3Q8NG57 546 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 SCFD1Q8WVM8 642 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 SECISBP2LQ93073 1101 aaKnown RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 HPDLQ96IR7 371 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 C7orf25Q9BPX7 421 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 SYT15Q9BQS2 421 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 EBF3Q9H4W6 596 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 MAGEF1Q9HAY2 307 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 KIAA1586Q9HCI6 787 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 AGPAT3Q9NRZ7 376 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 GKN1Q9NS71 199 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 TDP1Q9NUW8 608 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 C2orf42Q9NWW7 574 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 THG1LQ9NWX6 298 aaKnown RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 SERTAD1Q9UHV2 236 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 GMEB2Q9UKD1 530 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 MAGED2Q9UNF1 606 aaPredicted RBP7.53□□□□□ -1.2
SND1-205ENST00000467238 SPEGQ15772 3267 aa7.53□□□□□ -1.2
SND1-205ENST00000467238 TNRC6BQ9UPQ9 1833 aaKnown RBP7.52□□□□□ -1.2
SND1-205ENST00000467238 ARID1BQ8NFD5 2236 aaPredicted RBP7.52□□□□□ -1.2
SND1-205ENST00000467238 CHURC1-FNTBB4DL54 471 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 CLIC2O15247 247 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 POLR2DO15514 142 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 EFSO43281 561 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 ATP2C2O75185 946 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 F13A1P00488 732 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 DLATP10515 647 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 ARSAP15289 507 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 WARSP23381 471 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 LMO2P25791 158 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CASP1P29466 404 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 HOXA6P31267 233 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 HOXC13P31276 330 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CNR2P34972 360 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 FNTBP49356 437 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 PSMC1P62191 440 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 SNRPFP62306 86 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 FAM160A1Q05DH4 1040 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 MTF1Q14872 753 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 ZNF77Q15935 545 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 SNRNP35Q16560 246 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 LPAL2Q16609 132 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 BMT2Q1RMZ1 405 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 TMEM196Q5HYL7 178 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 LAIR1Q6GTX8 287 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 PKN3Q6P5Z2 889 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 VSTM1Q6UX27 236 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 C4orf50Q6ZRC1 276 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 TRAPPC11Q7Z392 1133 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 DGLUCYQ7Z3D6 616 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 LONP2Q86WA8 852 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 SCN4BQ8IWT1 228 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 XXYLT1Q8NBI6 393 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 FOXD4L4Q8WXT5 416 aaPredicted RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 MYLPFQ96A32 169 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 SLC22A12Q96S37 553 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CGRRF1Q99675 332 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 BLZF1Q9H2G9 400 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CRTAC1Q9NQ79 661 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 GCNT4Q9P109 453 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 CDH9Q9ULB4 789 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 RAB23Q9ULC3 237 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 USP18Q9UMW8 372 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
SND1-205ENST00000467238 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
SND1-205ENST00000467238 NME7Q9Y5B8 376 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms